Factsheet for TraesCS1B01G127800.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
extracellular 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	extracellular, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	extracellular
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G104900.1	Wheat	extracellular, plasma membrane, plastid	89.79	90.03
TraesCS1A01G095900.1	Wheat	cytosol, plasma membrane, plastid	71.73	85.36
TraesCS5B01G447400.1	Wheat	cytosol, plastid	63.35	53.66
Zm00001d021115_P001	Maize	cytosol	32.98	41.72
Zm00001d021117_P001	Maize	cytosol, plastid	34.29	39.22
Zm00001d021099_P001	Maize	cytosol, vacuole	33.25	38.02
Zm00001d021097_P001	Maize	cytosol	37.17	37.87
Zm00001d021107_P001	Maize	cytosol	35.86	37.64
Zm00001d021103_P001	Maize	cytosol	27.75	34.75
TraesCS3B01G507800.1	Wheat	cytosol, plasma membrane, plastid	35.08	34.1
TraesCS4B01G058700.1	Wheat	plastid	39.53	34.09
TraesCS3B01G507400.1	Wheat	cytosol	35.08	33.25
TraesCS3B01G508400.1	Wheat	cytosol	30.63	32.68
TraesCS2B01G363100.1	Wheat	cytosol, peroxisome, plastid	28.27	30.59
TraesCS3B01G507200.1	Wheat	cytosol	14.66	30.43
TraesCS3B01G572600.1	Wheat	peroxisome	25.92	30.37
TraesCS1B01G077100.1	Wheat	cytosol	33.51	29.91
TraesCS3B01G507700.1	Wheat	endoplasmic reticulum, golgi	32.98	29.37
TraesCS1B01G110300.1	Wheat	cytosol	26.18	28.17
EES02090	Sorghum	cytosol	28.53	26.33
TraesCS6B01G438000.1	Wheat	cytosol, plastid	27.23	25.49
TraesCS6B01G450800.1	Wheat	mitochondrion	26.96	23.57
TraesCS3B01G560000.1	Wheat	cytosol	24.08	22.83
TraesCS3B01G559900.1	Wheat	cytosol	23.82	22.52
TraesCS3B01G560700.1	Wheat	cytosol	19.9	19.34
TraesCS3B01G585500.1	Wheat	cytosol, mitochondrion	14.92	18.94
TraesCS3B01G597100.1	Wheat	mitochondrion, plastid	14.92	18.94
TraesCS3B01G560200.1	Wheat	cytosol	17.8	17.39
TraesCS3B01G536000.1	Wheat	cytosol	17.28	17.28
TraesCS3B01G553300.1	Wheat	cytosol	16.75	17.2
TraesCS6B01G350200.1	Wheat	cytosol	15.71	16.44
TraesCS3B01G562600.1	Wheat	peroxisome	16.23	15.7

Protein Annotations

EnsemblPlants:TraesCS1B01G127800.1	EnsemblPlantsGene:TraesCS1B01G127800	InterPro:DUF295	PANTHER:PTHR33165	PANTHER:PTHR33165:SF11	PFAM:PF03478
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr1B:-:156604606..156605754

Molecular Weight (calculated)

42561.2 Da

IEP (calculated)

7.820

GRAVY (calculated)

0.176

Length

382 amino acids

Sequence
(BLAST)

001: MGTRCWSSLM PELVDRIGSC LLDTADLDCY MALRAVCHNW RGATVDPKNT LHIRFRPHRW IMLDYSSHGE DVCLLVNTVS GRYHGRDMPL LRKYYIISIT
101: IDGLLVLMAK IPPHAVCVLN PFTGHMVHFV ARMRPNVLAA AVSNSSPPRL VLYCHDTMKL YMASPDTASF IRYITNYACP FVRKVVQGCV AVDGHQGLLP
201: PLPATVVAKI ADLLTPLIIG FPPDIQLDSQ KSCFLVESAG EILVIFKLVN RVEVFKMDGM GGNMLVRVKN IGSRSIFIGR SQRCLSLDAD KFPSIEANCI
301: YFTECLSSPS TDIYHLKDGE QVKNAMSVAG GAGPSMNLNM PAFLWHSMTE HPCTIFQLLS LYTFNWQSGQ ASHVLEYQDS IL

Best Arabidopsis Sequence Match ( AT5G53790.1 )
(BLAST)

001: MSLLFGLVAK HSVEESDAVR FCSYPRQTPY MLFNCSLGNV DRYSNITISY NIFNPRNEKI IKITDKVFVK SLPDPEQFVL LGTSRSWAAF TRIHDTIIFL
101: TDVFNPWSSE SSTRTITLPP LVSNGIKASV SLSTPSPDDD NDYIVSVSFF RSKLYYCMPN RDSEWTSTNI PFSCDFNSQV VYSRKRQMFY LLTTGCAYIA
201: ALDLKNNKDP TFLQIQFQNF PLIPQHEWEI LASCLRSDYI AESSSGERFI VQWYLTYVVE PWGNGNITKV FRETKRFMVF KEEEEHKFQR RKMIANYTEN
301: IGDLCIFIGR NETFCLEASK YPGLRRNSIY YTGHGFGVYD IRKKSFREYD SNLTKESKLS SISFIAKYQP VSTNRVLGFD

Arabidopsis Description

F-box protein, putative (DUF295) [Source:UniProtKB/TrEMBL;Acc:Q9FHZ7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.