Factsheet for TraesCS1D01G104900.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, extracellular

Predictor Summary:

extracellular 1
mitochondrion 1
plastid 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, plastid
Any Predictor:	extracellular, plasma membrane, plastid
MultiLoc:	extracellular
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G127800.1	Wheat	plasma membrane	90.03	89.79
TraesCS1A01G095900.1	Wheat	cytosol, plasma membrane, plastid	72.97	86.6
Zm00001d021115_P001	Maize	cytosol	32.28	40.73
Zm00001d021117_P001	Maize	cytosol, plastid	33.86	38.62
TraesCS3D01G069100.1	Wheat	cytosol	37.27	38.07
Zm00001d021097_P001	Maize	cytosol	37.01	37.6
Zm00001d021099_P001	Maize	cytosol, vacuole	32.55	37.13
Zm00001d021107_P001	Maize	cytosol	35.17	36.81
TraesCS1D01G365300.1	Wheat	cytosol	33.33	34.89
TraesCS4D01G058600.1	Wheat	cytosol	36.75	34.74
Zm00001d021103_P001	Maize	cytosol	27.3	34.1
TraesCS5D01G038100.1	Wheat	cytosol	39.11	34.1
TraesCS3D01G459700.1	Wheat	cytosol, plastid	35.43	33.42
TraesCS3D01G458000.1	Wheat	cytosol	35.96	33.09
TraesCS3D01G458200.1	Wheat	plastid	35.96	32.93
TraesCS3D01G512600.1	Wheat	cytosol, nucleus, peroxisome	31.23	32.87
TraesCS3D01G458900.1	Wheat	cytosol	34.12	32.5
TraesCS3D01G464100.1	Wheat	cytosol, mitochondrion, peroxisome	33.07	31.58
TraesCS3D01G458400.1	Wheat	cytosol	32.81	31.49
TraesCS2D01G343100.1	Wheat	cytosol	33.07	31.11
TraesCS3D01G458800.1	Wheat	cytosol	14.7	29.79
TraesCS3D01G457900.1	Wheat	plastid	32.55	29.31
TraesCS3D01G458300.1	Wheat	cytosol	31.23	28.95
TraesCS1D01G092000.1	Wheat	cytosol	25.98	27.89
TraesCS3D01G459500.1	Wheat	cytosol	32.55	27.37
TraesCS3D01G462200.1	Wheat	cytosol	30.71	26.29
EES02090	Sorghum	cytosol	28.08	25.85
TraesCS3D01G504700.1	Wheat	cytosol	22.05	22.89
TraesCS6D01G389700.1	Wheat	mitochondrion	25.72	22.43
TraesCS3D01G504800.1	Wheat	cytosol	22.05	20.64
TraesCS5D01G357400.1	Wheat	plastid	17.32	18.33
TraesCS7D01G325400.1	Wheat	cytosol, mitochondrion	17.32	18.13
TraesCS3D01G494300.1	Wheat	cytosol	20.21	16.31
TraesCS6D01G298900.1	Wheat	cytosol	15.49	16.25

Protein Annotations

EnsemblPlants:TraesCS1D01G104900.1	EnsemblPlantsGene:TraesCS1D01G104900	InterPro:DUF295	PANTHER:PTHR33165	PANTHER:PTHR33165:SF11	PFAM:PF03478
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr1D:+:96905590..96907034

Molecular Weight (calculated)

42239.7 Da

IEP (calculated)

8.068

GRAVY (calculated)

0.105

Length

381 amino acids

Sequence
(BLAST)

001: MGTRCWSSLM PELIDRIGGC LLDTADLDCY MALRAVCHNW RGATADPKNT LHTRFRPHHW VMLDYSSHGE HIRLLVNTVS GRYHGRDMPL LCKYYIISIT
101: IDGLLVLMAK IPPHAVCVLN PFTGHMVHFV ARMRPNVLAA AVSDSSPPRL VLYCHDTRKL YMGGPNSVSF IRYITNYACP FVRKVVQGCV AVDGHQGLMP
201: PLPAMVVAKI ADLMTPLIVG FPADDQLDSR KSCFLVESAG EILVIFKLGN HVEVFKMDGM GGNMLVRVKN IGSRSIFIGR SQRCLSLDAD KFPSIEANCI
301: YFTECLSSPS TDIYHLKDGE QVKNVMSAAG GAGPSVNLNM PTFLCHPMTE HPCTIIQLLS LYTFNWQSGQ ASQVLKYQDS S

Best Arabidopsis Sequence Match ( AT5G40100.1 )
(BLAST)

0001: MASSSASRAS SYDVFLSFRG EDTRHSIVSH LYEALTSRGI ATFKDDKRLE LGDHISEELQ RAIEGSDFVV VVLSENYPTS RWCLMELQSI MELQMEGRLG
0101: VFPVFYRVEP SAVRYQLGSF DLEGYQRDPQ MADMVPKWRQ ALKLIADLSG VASGQCIDEA TMVRKIVEDI SKRKTLKHKI DFRNFVGVDT HLQGLKSLLD
0201: MDSNNDEVRM IGIWGMGGIG KTTIAKCLYD QLSSQFTASY FTQDIKGIHK ELDLLHLQNR LLYNTLGDDI MPWSVEAGRE VIAARLGNHK VLLVLDGVDK
0301: LVQIHALAKE TRWFGRQSRI IITTRDKGLL NSCGVKTIYD VKCLDDKDSL QMFKQIAFEG GSPPSVDFEQ LSIRAARLAH GLPSALQAYA LFLRGRANSP
0401: EEWEEAVCGL ESTPDENIME ILKISYEGLA KAHQNAFLHV ACLFNGDTFR RVTSLLDVSR MESNLWMRVL AEKSLINITS NGYVTLHKLV EQMGREIMLA
0501: SGKFIGDPET IHDTLGMGQT ESISLHICEM TCAFSMATGV FSRMYKLRFL KVYKHVNERE SMLQVIPEDE YPSINCLLLH WDAFPLSKFP LRFNTYCLVE
0601: LNLRHSNLET LWSGVLKFGH LRKLDVTGSK NLKQLPDLSC AEELDELLLE QCKRLKGIPE SIAERSTLGR LNLSYYGGAK NPMGVVIQKV SQTQRITLLF
0701: PTSSVEMQLM NISITGDIRF RVFADFEGYA EYFSFSTEQK IHATRTVSVH QAPRLISELN KSTTLNIRRF SYKENGRPVT LHSFPDIPGL KQLELVNLNI
0801: QKLSDGIGHF EFLENLDLSG NDFENLPEDM NRLSRLKTLC LRNCSKLKEL PELTQVQSLT LSNCKNLRSL VKISDASQDP SLYSLLELCL DNCKNVKSLS
0901: DQLSHFPKLA YLDLSSHDFK KLPSSIRDLT SLVTLCLNNC KKLKSLEELP LSLQFLDAKG CDSLEADDLE HFKGRVNREV SAQPHSARFQ ETEMPSYEQD
1001: HQARKSRLPK FLCCSYF

Arabidopsis Description

Disease resistance protein (TIR-NBS-LRR class) family [Source:UniProtKB/TrEMBL;Acc:F4KFY5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.