Factsheet for TraesCS3D01G459700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid

Predictor Summary:

mitochondrion 1
cytosol 2
plastid 3
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G459500.1	Wheat	cytosol	68.07	60.71
TraesCS3D01G464100.1	Wheat	cytosol, mitochondrion, peroxisome	58.66	59.4
TraesCS3D01G458900.1	Wheat	cytosol	50.49	51.0
TraesCS3D01G462200.1	Wheat	cytosol	53.71	48.76
TraesCS3D01G458400.1	Wheat	cytosol	47.03	47.86
TraesCS3D01G458000.1	Wheat	cytosol	48.02	46.86
TraesCS2D01G343100.1	Wheat	cytosol	46.53	46.42
TraesCS3D01G458200.1	Wheat	plastid	46.78	45.43
TraesCS3D01G458300.1	Wheat	cytosol	44.55	43.8
TraesCS3D01G457900.1	Wheat	plastid	43.81	41.84
TraesCS3D01G458800.1	Wheat	cytosol	18.32	39.36
Zm00001d021115_P001	Maize	cytosol	29.21	39.07
TraesCS4D01G058600.1	Wheat	cytosol	38.12	38.21
TraesCS3D01G069100.1	Wheat	cytosol	34.41	37.27
TraesCS1D01G365300.1	Wheat	cytosol	32.92	36.54
Zm00001d021117_P001	Maize	cytosol, plastid	29.95	36.23
TraesCS1D01G104900.1	Wheat	extracellular, plasma membrane, plastid	33.42	35.43
Zm00001d021099_P001	Maize	cytosol, vacuole	29.21	35.33
Zm00001d021097_P001	Maize	cytosol	32.18	34.67
TraesCS5D01G038100.1	Wheat	cytosol	37.38	34.55
Zm00001d021107_P001	Maize	cytosol	29.95	33.24
TraesCS3D01G512600.1	Wheat	cytosol, nucleus, peroxisome	29.21	32.6
TraesCS1D01G092000.1	Wheat	cytosol	26.73	30.42
Zm00001d021103_P001	Maize	cytosol	21.78	28.85
EES02090	Sorghum	cytosol	27.72	27.05
TraesCS3D01G504700.1	Wheat	cytosol	23.51	25.89
TraesCS6D01G389700.1	Wheat	mitochondrion	25.25	23.34
TraesCS3D01G504800.1	Wheat	cytosol	22.77	22.6
TraesCS5D01G357400.1	Wheat	plastid	17.08	19.17
TraesCS7D01G325400.1	Wheat	cytosol, mitochondrion	13.37	14.84
TraesCS3D01G494300.1	Wheat	cytosol	17.33	14.83
TraesCS6D01G298900.1	Wheat	cytosol	13.12	14.6

Protein Annotations

EnsemblPlants:TraesCS3D01G459700.1	EnsemblPlantsGene:TraesCS3D01G459700	Gene3D:1.20.1280.50	InterPro:DUF295	PANTHER:PTHR33165	PANTHER:PTHR33165:SF11
PFAM:PF03478	SEG:seg	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr3D:-:564908593..564909859

Molecular Weight (calculated)

45108.2 Da

IEP (calculated)

6.692

GRAVY (calculated)

0.001

Length

404 amino acids

Sequence
(BLAST)

001: MAAAAADVLL PSKRQKNNPS CLGTLPVLPA TATADWSSLQ PDIVRHIANS FLTTDDVDCY MDLRAVCHNW RCATDDPKDD TSDPRFLPYR WIILNDAFQS
101: GTRRLLVNTS TGRFLHRELP LLRDYYVITT TLTGFFILTD RSPPHAARVF NPLTGGTIPF TVPVPPEVNV AGSICFDFTL PLLTLLCDSS HKLYMARPDQ
201: FEVEDHKFPV YSFIRRAVVG GLIGRWWGSA GMADVIGKIL GVAESLRAHP LKFFSTDPPE MGSADNARCF LMDFGGHLLA IIKGQGLIQV FKCDDENGTL
301: SHVKSIIKHA IFIGHHRCLA VNTDMFPSIE ANCIYYTEHL GSSARIWKFN IEDRKVETVS EAVDFAKKDK QFVLVADRPF TIIQLLSSYT INIQDSELAL
401: QQIT

Best Arabidopsis Sequence Match ( AT5G03390.1 )
(BLAST)

001: MSQLLGRTAK ISSVVKKQRL CFSELRSFST AATPYLLLKD TNYRAASGGS VVDINLYDPR KKEIVKIRDQ YLSEELQCTM KMGSSRGWIV AKTIYEPTLY
101: LTNIFNPCAS VSSHKVFNLP PLEDDAKARI SSISLSASPN QQDCVLAVKS SSSPFLSLWR PGDSAWTRIK VPFPASNVMM YSGRDRKFYL LPRESKEECE
201: GPIDLINTSS DDFPQVTLYQ RFPNSDIPVS RQEQLLSSIK TRYLVESPSG DSFIVYWCNE RSFYWKKGEV KPWTGKNPPP SRISCRLKTR TFVVFRQDSE
301: QGIGSYTEDI GDLCIFLGHR EAFCVSATEY PGLRPNSVYY ATSGTGFGYY DLSSNTLHDV IHEGLFSWIA PLQ

Arabidopsis Description

At5g03390 [Source:UniProtKB/TrEMBL;Acc:Q9LZF0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.