Factsheet for TraesCS3D01G459500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G464700.1	Wheat	cytosol	83.0	92.84
TraesCS3B01G508400.1	Wheat	cytosol	65.56	82.96
TraesCS3D01G459700.1	Wheat	cytosol, plastid	60.71	68.07
TraesCS3D01G464100.1	Wheat	cytosol, mitochondrion, peroxisome	50.33	57.14
TraesCS3D01G462200.1	Wheat	cytosol	48.12	48.99
TraesCS3D01G458900.1	Wheat	cytosol	40.4	45.75
TraesCS3D01G458400.1	Wheat	cytosol	39.96	45.59
TraesCS3D01G458000.1	Wheat	cytosol	41.28	45.17
TraesCS3D01G458200.1	Wheat	plastid	40.4	43.99
TraesCS3D01G458300.1	Wheat	cytosol	38.85	42.82
TraesCS2D01G343100.1	Wheat	cytosol	37.97	42.47
TraesCS3D01G457900.1	Wheat	plastid	37.53	40.19
Zm00001d021115_P001	Maize	cytosol	26.05	39.07
TraesCS3D01G458800.1	Wheat	cytosol	15.23	36.7
TraesCS4D01G058600.1	Wheat	cytosol	32.23	36.23
TraesCS3D01G069100.1	Wheat	cytosol	29.8	36.19
Zm00001d021117_P001	Maize	cytosol, plastid	26.05	35.33
Zm00001d021099_P001	Maize	cytosol, vacuole	26.05	35.33
TraesCS1D01G365300.1	Wheat	cytosol	28.26	35.16
Zm00001d021097_P001	Maize	cytosol	28.26	34.13
TraesCS5D01G038100.1	Wheat	cytosol	32.23	33.41
TraesCS3D01G512600.1	Wheat	cytosol, nucleus, peroxisome	26.49	33.15
TraesCS1D01G104900.1	Wheat	extracellular, plasma membrane, plastid	27.37	32.55
Zm00001d021107_P001	Maize	cytosol	25.83	32.14
TraesCS1D01G092000.1	Wheat	cytosol	23.84	30.42
EES02090	Sorghum	cytosol	24.94	27.29
Zm00001d021103_P001	Maize	cytosol	17.66	26.23
TraesCS3D01G504700.1	Wheat	cytosol	20.75	25.61
TraesCS6D01G389700.1	Wheat	mitochondrion	21.63	22.43
TraesCS3D01G504800.1	Wheat	cytosol	20.09	22.36
TraesCS7D01G325400.1	Wheat	cytosol, mitochondrion	13.02	16.21
TraesCS5D01G357400.1	Wheat	plastid	12.8	16.11
TraesCS3D01G494300.1	Wheat	cytosol	16.34	15.68
TraesCS6D01G298900.1	Wheat	cytosol	11.7	14.6

Protein Annotations

EnsemblPlants:TraesCS3D01G459500.1	EnsemblPlantsGene:TraesCS3D01G459500	InterPro:DUF295	PANTHER:PTHR33165	PANTHER:PTHR33165:SF11	PFAM:PF03478
SEG:seg	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr3D:+:564639224..564641059

Molecular Weight (calculated)

50625.4 Da

IEP (calculated)

7.631

GRAVY (calculated)

-0.014

Length

453 amino acids

Sequence
(BLAST)

001: MEEANRRATR APPRRRIGAL DSAMDSVLEI QNQAKQQLQR VAMAAAPIEV LPPCKRQKKN PSCLGTSPVL PATSTADWSS LQLDIVRRIA DSFLATNDID
101: CYMDLRAVCH SWRYATDDPK ENILDYQFLP RRWIILDEVF QSGTRCLLVN TATGRILHKE LPLLSDYYIV TTTLDGFFVL ADRRPPHAAR VFNPLTGGII
201: PFTVPVPPEV KVTCSLCFEF ASPMLTLLSK SCCKIYISSP HSIRTENFEI SLYGLFRRAV KGDLAGLWWL PAGSSESAET AAVNAIGKIS NVMKSLHVDP
301: LKFFSSDPPD MGLADDTKCF LMDFGGQLLA TIKGQLVQIF RYEAKNGVLL HLKSIGNHAI FLGHHKCLAV DTDMFPLIEA NCVYYTEQLG LSARIRKCNI
401: KDEKVESISE AVDFVKQEKQ FVLVGDRPFT IIQLLASYTI NIRDSELALH QIT

Best Arabidopsis Sequence Match ( AT5G03390.1 )
(BLAST)

001: MSQLLGRTAK ISSVVKKQRL CFSELRSFST AATPYLLLKD TNYRAASGGS VVDINLYDPR KKEIVKIRDQ YLSEELQCTM KMGSSRGWIV AKTIYEPTLY
101: LTNIFNPCAS VSSHKVFNLP PLEDDAKARI SSISLSASPN QQDCVLAVKS SSSPFLSLWR PGDSAWTRIK VPFPASNVMM YSGRDRKFYL LPRESKEECE
201: GPIDLINTSS DDFPQVTLYQ RFPNSDIPVS RQEQLLSSIK TRYLVESPSG DSFIVYWCNE RSFYWKKGEV KPWTGKNPPP SRISCRLKTR TFVVFRQDSE
301: QGIGSYTEDI GDLCIFLGHR EAFCVSATEY PGLRPNSVYY ATSGTGFGYY DLSSNTLHDV IHEGLFSWIA PLQ

Arabidopsis Description

At5g03390 [Source:UniProtKB/TrEMBL;Acc:Q9LZF0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.