Factsheet for TraesCS3D01G458900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G464300.1	Wheat	cytosol	91.75	91.75
TraesCS3D01G458800.1	Wheat	cytosol	28.25	60.11
TraesCS3D01G459700.1	Wheat	cytosol, plastid	51.0	50.49
TraesCS3D01G464100.1	Wheat	cytosol, mitochondrion, peroxisome	45.5	45.61
TraesCS3D01G457900.1	Wheat	plastid	48.0	45.39
TraesCS3D01G458400.1	Wheat	cytosol	43.75	44.08
TraesCS3D01G458300.1	Wheat	cytosol	45.0	43.8
TraesCS3D01G458200.1	Wheat	plastid	45.25	43.51
Zm00001d021115_P001	Maize	cytosol	31.75	42.05
TraesCS3D01G458000.1	Wheat	cytosol	43.5	42.03
TraesCS2D01G343100.1	Wheat	cytosol	41.5	40.99
TraesCS3D01G459500.1	Wheat	cytosol	45.75	40.4
TraesCS4D01G058600.1	Wheat	cytosol	40.5	40.2
TraesCS3D01G462200.1	Wheat	cytosol	43.0	38.65
Zm00001d021117_P001	Maize	cytosol, plastid	32.25	38.62
Zm00001d021099_P001	Maize	cytosol, vacuole	32.0	38.32
TraesCS1D01G365300.1	Wheat	cytosol	34.25	37.64
Zm00001d021097_P001	Maize	cytosol	35.0	37.33
Zm00001d021107_P001	Maize	cytosol	33.5	36.81
TraesCS3D01G069100.1	Wheat	cytosol	33.0	35.39
TraesCS5D01G038100.1	Wheat	cytosol	38.0	34.78
TraesCS3D01G512600.1	Wheat	cytosol, nucleus, peroxisome	31.0	34.25
TraesCS1D01G104900.1	Wheat	extracellular, plasma membrane, plastid	32.5	34.12
Zm00001d021103_P001	Maize	cytosol	23.75	31.15
EES02090	Sorghum	cytosol	32.0	30.92
TraesCS1D01G092000.1	Wheat	cytosol	25.0	28.17
TraesCS3D01G504700.1	Wheat	cytosol	24.0	26.16
TraesCS6D01G389700.1	Wheat	mitochondrion	26.25	24.03
TraesCS3D01G504800.1	Wheat	cytosol	24.25	23.83
TraesCS5D01G357400.1	Wheat	plastid	17.0	18.89
TraesCS3D01G494300.1	Wheat	cytosol	20.75	17.58
TraesCS7D01G325400.1	Wheat	cytosol, mitochondrion	15.5	17.03
TraesCS6D01G298900.1	Wheat	cytosol	14.0	15.43

Protein Annotations

EnsemblPlants:TraesCS3D01G458900.1	EnsemblPlantsGene:TraesCS3D01G458900	Gene3D:1.20.1280.50	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:DUF295	InterPro:F-box-like_dom_sf	PANTHER:PTHR33165	PANTHER:PTHR33165:SF11	PFAM:PF03478	SEG:seg
SUPFAM:SSF81383	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr3D:+:564144327..564145529

Molecular Weight (calculated)

44587.2 Da

IEP (calculated)

6.983

GRAVY (calculated)

-0.001

Length

400 amino acids

Sequence
(BLAST)

001: MAAAPGDEVP TPLAAPVPPA TAVAGWSSLP TDLVRRIADC LLDTNDVDCY VDLRAVCHNW RSATEDPRSD VSDPRFHPRF WIVLDDDEAF QSDGCRVLVN
101: TATGRFLRKQ LPLPRHYYVV TTTVSGFFVL ADRSPTHAAR VLNPLTGAVV RFKAPVPRDT TVAVFFFSGS TLHNLTVLCD STGKYYTAVP ESKRFAPETT
201: NDAIYNYMRK AVVGGVYANG GGWASVAQSN VIMEKLFNLS EQLKVHFFKF FSVDPLGHRG DVRCFLLDFG GEVFFITKAW GRVMVLGIEP TEKQTLAPVE
301: TVGRYAIFIG HQRCLVVDAA KFPSVEADCV YYTLDVGKFA FIWKHSLSDW KDERVFDAID FVKENKRFVP VGARPFTIIQ LLSSYTINIS DSELASKQSW

Best Arabidopsis Sequence Match ( AT5G53790.1 )
(BLAST)

001: MSLLFGLVAK HSVEESDAVR FCSYPRQTPY MLFNCSLGNV DRYSNITISY NIFNPRNEKI IKITDKVFVK SLPDPEQFVL LGTSRSWAAF TRIHDTIIFL
101: TDVFNPWSSE SSTRTITLPP LVSNGIKASV SLSTPSPDDD NDYIVSVSFF RSKLYYCMPN RDSEWTSTNI PFSCDFNSQV VYSRKRQMFY LLTTGCAYIA
201: ALDLKNNKDP TFLQIQFQNF PLIPQHEWEI LASCLRSDYI AESSSGERFI VQWYLTYVVE PWGNGNITKV FRETKRFMVF KEEEEHKFQR RKMIANYTEN
301: IGDLCIFIGR NETFCLEASK YPGLRRNSIY YTGHGFGVYD IRKKSFREYD SNLTKESKLS SISFIAKYQP VSTNRVLGFD

Arabidopsis Description

F-box protein, putative (DUF295) [Source:UniProtKB/TrEMBL;Acc:Q9FHZ7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.