Factsheet for TraesCS3A01G464300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G458900.1	Wheat	cytosol	91.75	91.75
TraesCS3A01G464200.1	Wheat	cytosol	77.5	78.28
TraesCS3A01G467500.1	Wheat	cytosol	41.0	46.07
TraesCS3A01G464700.1	Wheat	cytosol	44.5	43.95
TraesCS6A01G141000.1	Wheat	cytosol	36.25	43.94
TraesCS3A01G463900.1	Wheat	plastid	44.5	42.79
Zm00001d021115_P001	Maize	cytosol	31.5	41.72
TraesCS3A01G464100.1	Wheat	plastid	40.75	39.66
Zm00001d021099_P001	Maize	cytosol, vacuole	32.0	38.32
Zm00001d021097_P001	Maize	cytosol	35.25	37.6
Zm00001d021117_P001	Maize	cytosol, plastid	31.25	37.43
Zm00001d021107_P001	Maize	cytosol	33.5	36.81
TraesCS3A01G463800.1	Wheat	extracellular, vacuole	22.5	36.73
TraesCS1A01G095900.1	Wheat	cytosol, plasma membrane, plastid	29.25	36.45
TraesCS3A01G497100.1	Wheat	cytosol	38.0	35.35
EES02090	Sorghum	cytosol	32.25	31.16
Zm00001d021103_P001	Maize	cytosol	23.5	30.82
TraesCS5A01G442900.1	Wheat	cytosol	35.0	30.7
TraesCS5A01G350400.1	Wheat	cytosol	20.75	22.99
TraesCS3A01G498000.1	Wheat	cytosol	19.5	19.85
TraesCS3A01G497400.1	Wheat	peroxisome	18.0	18.32
TraesCS3A01G497300.1	Wheat	cytosol	17.0	16.96

Protein Annotations

EnsemblPlants:TraesCS3A01G464300.1	EnsemblPlantsGene:TraesCS3A01G464300	Gene3D:1.20.1280.50	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:DUF295	InterPro:F-box-like_dom_sf	PANTHER:PTHR33165	PANTHER:PTHR33165:SF11	PFAM:PF03478	SEG:seg
SUPFAM:SSF81383	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr3A:+:698733115..698734745

Molecular Weight (calculated)

44336.1 Da

IEP (calculated)

7.772

GRAVY (calculated)

0.023

Length

400 amino acids

Sequence
(BLAST)

001: MAAAPGDEVP TPFAAPVPPA TAVAGWSSLP TDLVRRIADC LLDTNDVDCY VDLRAVCHNW RSATDDPRSD VSDPRFHPRF WIVLDDDGAF QSDDSRVLVN
101: TATGRFLRKK LPLPRHYYVV TTTVSGFFVL ADRSPPHAAR VLNPLIGAVV RFKAPLPRDA SVAVFLFCGG TSHNLTVLCD STRKYYTAVP ESKRFAPVTT
201: NDVMYNYMRK AVVGGVYANG GGWASVAQSN VIMEKLFNLS EQLKVHFVKF FSVDPLGHRG DVRCFLLDFG GEVFFITKAW GRVMVLGIEP TEKQMLAPVE
301: TVGRYAIFVG HQRCLVVDAA KFPSVEADCV YYTLDVGKFA FIWKHSISDG KDERVFDAID FVKENKRFVP VGARPFTIIQ LLSSYTINLS DSELASKQSS

Best Arabidopsis Sequence Match ( AT5G53790.1 )
(BLAST)

001: MSLLFGLVAK HSVEESDAVR FCSYPRQTPY MLFNCSLGNV DRYSNITISY NIFNPRNEKI IKITDKVFVK SLPDPEQFVL LGTSRSWAAF TRIHDTIIFL
101: TDVFNPWSSE SSTRTITLPP LVSNGIKASV SLSTPSPDDD NDYIVSVSFF RSKLYYCMPN RDSEWTSTNI PFSCDFNSQV VYSRKRQMFY LLTTGCAYIA
201: ALDLKNNKDP TFLQIQFQNF PLIPQHEWEI LASCLRSDYI AESSSGERFI VQWYLTYVVE PWGNGNITKV FRETKRFMVF KEEEEHKFQR RKMIANYTEN
301: IGDLCIFIGR NETFCLEASK YPGLRRNSIY YTGHGFGVYD IRKKSFREYD SNLTKESKLS SISFIAKYQP VSTNRVLGFD

Arabidopsis Description

F-box protein, putative (DUF295) [Source:UniProtKB/TrEMBL;Acc:Q9FHZ7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.