Factsheet for TraesCS3A01G463800.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole, extracellular

Predictor Summary:

mitochondrion 1
vacuole 3
plasma membrane 2
extracellular 3
endoplasmic reticulum 2
golgi 2
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	cytosol, plastid, secretory
iPSORT:	mitochondrion
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G507200.1	Wheat	cytosol	55.1	73.37
TraesCS3D01G457900.1	Wheat	plastid	64.08	37.12
TraesCS3A01G463900.1	Wheat	plastid	45.31	26.68
TraesCS3A01G467500.1	Wheat	cytosol	33.88	23.31
Zm00001d021115_P001	Maize	cytosol	28.16	22.85
TraesCS3A01G464300.1	Wheat	cytosol	36.73	22.5
TraesCS3A01G464700.1	Wheat	cytosol	35.51	21.48
Zm00001d021097_P001	Maize	cytosol	32.65	21.33
Zm00001d021117_P001	Maize	cytosol, plastid	28.57	20.96
TraesCS3A01G464100.1	Wheat	plastid	35.1	20.92
TraesCS3A01G464200.1	Wheat	cytosol	33.06	20.45
Zm00001d021099_P001	Maize	cytosol, vacuole	27.76	20.36
Zm00001d021103_P001	Maize	cytosol	25.31	20.33
Zm00001d021107_P001	Maize	cytosol	28.57	19.23
TraesCS3A01G497100.1	Wheat	cytosol	31.84	18.14
TraesCS6A01G141000.1	Wheat	cytosol	22.04	16.36
TraesCS5A01G442900.1	Wheat	cytosol	29.39	15.79
TraesCS1A01G095900.1	Wheat	cytosol, plasma membrane, plastid	20.41	15.58
EES02090	Sorghum	cytosol	23.27	13.77
TraesCS5A01G350400.1	Wheat	cytosol	10.61	7.2
TraesCS3A01G498000.1	Wheat	cytosol	10.2	6.36
TraesCS3A01G497300.1	Wheat	cytosol	10.2	6.23
TraesCS3A01G497400.1	Wheat	peroxisome	9.39	5.85

Protein Annotations

EnsemblPlants:TraesCS3A01G463800.1	EnsemblPlantsGene:TraesCS3A01G463800	InterPro:DUF295	PANTHER:PTHR33165	PFAM:PF03478	SEG:seg
SignalP:SignalP-noTM	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr3A:-:698030356..698031093

Molecular Weight (calculated)

27425.2 Da

IEP (calculated)

9.039

GRAVY (calculated)

-0.074

Length

245 amino acids

Sequence
(BLAST)

001: MRVCVLSLLS LVCVLEKRET QVRVVRGNSR KKMKCGAAGG GANIFYGGYK AKEYPNYNSA RMAVAGGLYT NDATTGFIAE SEGWFPKICD LIHVNPHKED
101: VWRFLVQLGG QVLIVVRLRG RVKVFKYDDA EPVPVESIGR HAIFVGHHRC LAVDADRFPS VEADCVYYID RRGLSAHICV YSLRDGKEER VSAGAVDFVK
201: PHKLFVLVAD RPFTVIQLLC SYTINARDSQ LPLKEDAGNV DKKWF

Best Arabidopsis Sequence Match ( AT4G25920.1 )
(BLAST)

001: MSKLIINRIF KPSVCKNFLR HANVRLFSSA THTSTKVNQP FSSKPAFPFL LIDYILNNPN SSSDGRVTTN VYGNEKEVLI KDKDLKEEVC DAMTVGFSRD
101: GLRVELCGNH GDVCSPTIFY KPTDPEIEDL TVDLPPLPTG SQIQSLVMSS LPKRDKNWVV VVKLLGSQLS MCRPFGSRKW INIQTKPQNI NPSSSIMFSK
201: KEKKFYVPTP GGNILCYLDP HSEDDDLIDF VELEFDDLPK SVFQELADVS TCSRTDHLVE SPTGQLFLVK WYGEDLEDID NTTLYNVTKK FMVFKEGEKP
301: SCVYTKKMIY TEDIGDLCIF VGHSEAFCVP ASSSPGLKPN CIYFVGYNFG VYDLTTKTCT MFLTKDDNPL RKLEFPYWPP PASFPVLAPN

Arabidopsis Description

Uncharacterized protein At4g25920 [Source:UniProtKB/TrEMBL;Acc:Q8H1S2]
SUBAcon: [plastid,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.