Factsheet for TraesCS3A01G464200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 2
plastid 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G507800.1	Wheat	cytosol, plasma membrane, plastid	85.1	85.75
TraesCS3A01G464300.1	Wheat	cytosol	78.28	77.5
TraesCS3D01G458800.1	Wheat	cytosol	30.56	64.36
TraesCS3A01G467500.1	Wheat	cytosol	38.64	42.98
TraesCS6A01G141000.1	Wheat	cytosol	35.1	42.12
TraesCS3A01G464700.1	Wheat	cytosol	42.42	41.48
TraesCS3A01G463900.1	Wheat	plastid	42.68	40.62
Zm00001d021115_P001	Maize	cytosol	30.3	39.74
Zm00001d021099_P001	Maize	cytosol, vacuole	31.31	37.13
TraesCS1A01G095900.1	Wheat	cytosol, plasma membrane, plastid	30.05	37.07
TraesCS3A01G464100.1	Wheat	plastid	38.13	36.74
Zm00001d021107_P001	Maize	cytosol	32.83	35.71
Zm00001d021097_P001	Maize	cytosol	33.08	34.93
Zm00001d021117_P001	Maize	cytosol, plastid	29.04	34.43
TraesCS3A01G463800.1	Wheat	extracellular, vacuole	20.45	33.06
TraesCS3A01G497100.1	Wheat	cytosol	35.61	32.79
EES02090	Sorghum	cytosol	32.32	30.92
Zm00001d021103_P001	Maize	cytosol	23.74	30.82
TraesCS5A01G442900.1	Wheat	cytosol	35.1	30.48
TraesCS5A01G350400.1	Wheat	cytosol	19.19	21.05
TraesCS3A01G498000.1	Wheat	cytosol	18.94	19.08
TraesCS3A01G497400.1	Wheat	peroxisome	17.42	17.56
TraesCS3A01G497300.1	Wheat	cytosol	16.67	16.46

Protein Annotations

EnsemblPlants:TraesCS3A01G464200.1	EnsemblPlantsGene:TraesCS3A01G464200	Gene3D:1.20.1280.50	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:DUF295	InterPro:F-box-like_dom_sf	PANTHER:PTHR33165	PANTHER:PTHR33165:SF11	PFAM:PF03478	SUPFAM:SSF81383
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr3A:+:698710570..698711760

Molecular Weight (calculated)

44450.1 Da

IEP (calculated)

6.505

GRAVY (calculated)

0.018

Length

396 amino acids

Sequence
(BLAST)

001: MAAAPTRVEV PTRLAAPVPP SMAAAGWSSL PTDLVRRIAD CLLDTNDVDC YVDLRAVCHN WRSATEDPRT DASDPRFYPR FWIVLDDDGA FQSDGCRVLV
101: NTATGRFLRK QLPLPRHYYV VTTTVNGFFV LADRSPPHAA RVLNPLTGAV VVFKAPMPRD ASVAVFFSCG GTAHNLTVLC DSTRKYYTAV PDRESFVAGD
201: IDDVFYHYMR KVVVGIVYSN GAGWVSVAQS NVIMEYLLDL SEKLQIDFVK FFSVDPLGDH SDVRCFLLHF GGEVFFITMA LERIALLGME PTEKQALTHV
301: KTVGRYAIFI GHQRCLVVDA AKFPSVEADC VYYTQDVGKF AFIWKHNTRD GKDERVYDDI NFVKEDKQFV FSGRRPFTII QLLSSYTINL SNSEFV

Best Arabidopsis Sequence Match ( AT2G17036.2 )
(BLAST)

001: MDWATLPKDL LDLISKCLES SFDLIQFRSV CSSWRSAAGP KRLLWAHNLP FFPSDDKPFL SNVILRVAHQ SILLIKPNEP QCEADLFGWI VKVWDNIYVS
101: RKMTLLKPLS SSRNYFPQHL PRIFDMSKFT VRELCREVKL YHPDYYCVPG HTALELELGK TVVKYLNDDK FVLLTILEYG KLAVFRSWDR EWTVINDYIP
201: SRCQDLIMFD GRFFAIDYNG RTVVVDYSSF KLTLAANPLI GGGDKKFLIE SCGEMFLVDI EFCLNEKPEF TGGFYSYFNE TTVSYKFKFF KLVEREKRWV
301: EVEDLGDKMF FLGDDSTFSA STADIIPRCV GTGSFVFFYT HEESLVVMDD RNLGVFDFRS GKTELVNKLP EYAKLFWPPP PWITTSHESV ENYTGETSSQ
401: SQS

Arabidopsis Description

F-box protein At2g17036 [Source:UniProtKB/Swiss-Prot;Acc:Q6DR20]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.