Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- cytosol 3
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G447400.1 | Wheat | cytosol, plastid | 82.46 | 83.37 |
| TraesCS1A01G095900.1 | Wheat | cytosol, plasma membrane, plastid | 43.86 | 62.31 |
| TraesCS6A01G141000.1 | Wheat | cytosol | 30.7 | 42.42 |
| TraesCS3A01G463900.1 | Wheat | plastid | 35.31 | 38.7 |
| TraesCS3A01G464200.1 | Wheat | cytosol | 30.48 | 35.1 |
| TraesCS3A01G464300.1 | Wheat | cytosol | 30.7 | 35.0 |
| TraesCS3A01G467500.1 | Wheat | cytosol | 26.32 | 33.71 |
| KXG34167 | Sorghum | cytosol | 22.59 | 32.49 |
| TraesCS3A01G464700.1 | Wheat | cytosol | 28.51 | 32.1 |
| TraesCS3A01G497100.1 | Wheat | cytosol | 30.04 | 31.86 |
| OQU88199 | Sorghum | cytosol, extracellular, plastid | 19.52 | 30.38 |
| TraesCS3A01G464100.1 | Wheat | plastid | 26.75 | 29.68 |
| TraesCS3A01G463800.1 | Wheat | extracellular, vacuole | 15.79 | 29.39 |
| Os03t0783800-00 | Rice | nucleus | 19.52 | 23.06 |
| TraesCS5A01G350400.1 | Wheat | cytosol | 16.45 | 20.78 |
| TraesCS3A01G498000.1 | Wheat | cytosol | 17.54 | 20.36 |
| TraesCS3A01G497300.1 | Wheat | cytosol | 17.11 | 19.45 |
| TraesCS3A01G497400.1 | Wheat | peroxisome | 16.23 | 18.83 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G442900.1 | EnsemblPlantsGene:TraesCS5A01G442900 | InterPro:DUF295 | PANTHER:PTHR33165 | PANTHER:PTHR33165:SF11 | PFAM:PF03478 |
| SEG:seg | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr5A:-:623205530..623207384
Molecular Weight (calculated)
50238.2 Da
IEP (calculated)
6.997
GRAVY (calculated)
-0.129
Length
456 amino acids
Sequence
(BLAST)
(BLAST)
001: MNPRSSSLDH PRECFTCGTL IHAPRSGNLR DRTPPSRRSA AMEEREAQRW ASLMPELVDR VANLLLDTAD VDCYMALRAV CHSWRAATAD PGRTLDPRFR
101: PRGWVMLDYP SHGVDARLLV NTATGRFHGR RMPILGAYFV VSVTADGLLV LAARDPPHAA CVLHPFTGHM VRFAARMRAH VLAAAVSGSS PPYLVLYCQD
201: SMKLYRASPD SKEFVRYKKR YAYPLVRKAV QGLVAVDGHQ GHLPPLPAAV VAKIADLMSP FNDVPADVPA EGIDTASWKR CFVVESAGET LVVFKLESRV
301: EVFKMDTAAS TLERIKSIGS RAIFAGGCHR CVCLDADKFP SIEANCVYFT DRLGSESTDM YRLNDGEQRE SVVMSAAGGD DAPSVNLDLP AFLCHPMTAH
401: PFTIIQLLSI YTFNMQSGQV TQVVEEEGRI LEKLRSGEMS FSDLLRSCQA DSDADD
101: PRGWVMLDYP SHGVDARLLV NTATGRFHGR RMPILGAYFV VSVTADGLLV LAARDPPHAA CVLHPFTGHM VRFAARMRAH VLAAAVSGSS PPYLVLYCQD
201: SMKLYRASPD SKEFVRYKKR YAYPLVRKAV QGLVAVDGHQ GHLPPLPAAV VAKIADLMSP FNDVPADVPA EGIDTASWKR CFVVESAGET LVVFKLESRV
301: EVFKMDTAAS TLERIKSIGS RAIFAGGCHR CVCLDADKFP SIEANCVYFT DRLGSESTDM YRLNDGEQRE SVVMSAAGGD DAPSVNLDLP AFLCHPMTAH
401: PFTIIQLLSI YTFNMQSGQV TQVVEEEGRI LEKLRSGEMS FSDLLRSCQA DSDADD
001: METCNGLMRK NKRQKVSRNS DWSKLCPDVL RKIYETLRSP VDSHRAKIVC SNWYSVWKTC VKRPLCPLRI IHQGDSPTVG DGNRKLMGFS YNSYCMASSG
101: NWLLMVDRCL KFYIYNLLTK ERIDLPSMES KIRGGQVSFK SKSNNYNFGY LVGPSRKDDI VPYDYEAVEW KKSLAVLWVD ETTGDYAVAW TFMRQYLFSY
201: IKGDYSWCNL NHNGKSLVLF DMACENNKLY LLTMDHHIKI FNFYGDFLTG EQNLYPFNFV EDPSEYVWKR KIVIRRSGEV LIVLSLKKKV QNEEKLLFYI
301: FKMNLESRKW ERVYCIGDEM LIFGRGVTAL ALEDLDDGIK SNSIYFVGED VWPDHQEHEH RVSNCGFFDI ATSKIEWPKK IYCFINQNQW FVGGVAY
101: NWLLMVDRCL KFYIYNLLTK ERIDLPSMES KIRGGQVSFK SKSNNYNFGY LVGPSRKDDI VPYDYEAVEW KKSLAVLWVD ETTGDYAVAW TFMRQYLFSY
201: IKGDYSWCNL NHNGKSLVLF DMACENNKLY LLTMDHHIKI FNFYGDFLTG EQNLYPFNFV EDPSEYVWKR KIVIRRSGEV LIVLSLKKKV QNEEKLLFYI
301: FKMNLESRKW ERVYCIGDEM LIFGRGVTAL ALEDLDDGIK SNSIYFVGED VWPDHQEHEH RVSNCGFFDI ATSKIEWPKK IYCFINQNQW FVGGVAY
Arabidopsis Description
Putative F-box protein At2g04810 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ78]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.