Subcellular Localization
min:
: max
Winner_takes_all: cytosol, plastid, extracellular
Predictor Summary:
Predictor Summary:
- plasma membrane 1
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG34167 | Sorghum | cytosol | 51.88 | 47.95 |
| EES02090 | Sorghum | cytosol | 31.4 | 22.22 |
| TraesCS5B01G447400.1 | Wheat | cytosol, plastid | 31.06 | 20.18 |
| TraesCS5A01G442900.1 | Wheat | cytosol | 30.38 | 19.52 |
| Os03t0783800-00 | Rice | nucleus | 20.82 | 15.8 |
| EER98142 | Sorghum | mitochondrion | 16.72 | 15.12 |
| EER98141 | Sorghum | cytosol, mitochondrion | 21.84 | 14.16 |
| TraesCS3B01G560700.1 | Wheat | cytosol | 16.04 | 11.96 |
| TraesCSU01G057900.1 | Wheat | cytosol | 16.04 | 11.9 |
| TraesCS3A01G498000.1 | Wheat | cytosol | 15.36 | 11.45 |
Protein Annotations
| EnsemblPlants:OQU88199 | EnsemblPlantsGene:SORBI_3003G425900 | InterPro:DUF295 | PANTHER:PTHR33165 | PANTHER:PTHR33165:SF11 | PFAM:PF03478 |
| ProteinID:OQU88199 | ProteinID:OQU88199.1 | SEG:seg | UniParc:UPI0009DC92AC | UniProt:A0A1W0W1B7 | MapMan:35.2 |
Description
hypothetical protein
Coordinates
chr3:-:73010266..73012200
Molecular Weight (calculated)
33079.3 Da
IEP (calculated)
4.185
GRAVY (calculated)
-0.354
Length
293 amino acids
Sequence
(BLAST)
(BLAST)
001: MPLGWSSLPA DLVNRVADCL LATNDLDCYT DLRAVCHHWR SVTADPSQHD PRFRPSPQPS ESFSVDKNHG DCPASRLPLI AAAGKCAAAN RESVPGAENI
101: FDKFSSDVDD DCRCYAVAAA GGDMLAVLKW RRHGVDVFKV DAAGNVVDSV KSIGSQALFL GVRCLVVDAD YFPTVEPNCA YFQLTDQYLD QRYIYKFSIG
201: RDYYHEEEPE LVSAAMGNMR PTTLTQLLCN YTMDIPVPGH LLTWERRCSN LELECEDYID YVDGDFDEYS WYQPYPDFDQ YVSSDDDDYC PWF
101: FDKFSSDVDD DCRCYAVAAA GGDMLAVLKW RRHGVDVFKV DAAGNVVDSV KSIGSQALFL GVRCLVVDAD YFPTVEPNCA YFQLTDQYLD QRYIYKFSIG
201: RDYYHEEEPE LVSAAMGNMR PTTLTQLLCN YTMDIPVPGH LLTWERRCSN LELECEDYID YVDGDFDEYS WYQPYPDFDQ YVSSDDDDYC PWF
001: MADWSTLPVD LLNMIAGRLF SNIELKRFRS ICRSWRSSVP GAGKKNPFRT RPLILLNPNP NKPLTDHRRR GEFLSRSAFF RVTLSSSPSQ GWLIKSDVDV
101: SSGKLHLLDP LSRLPMEHSR KRVDLSEFTI TEIREAYQVH DWRTRKETRP IFKRVALVKD KEGDNQVLGI RSTGKMMYWD IKTWKAKEEG YEFSDIIVHK
201: GQTYALDSIG IVYWIRSDLK FIRFGPLVGD WTGDRRLVEC CGEFYIVERL VGESTWKRKA DDTGYEYAKT VGFKVYKFDD EQGKMMEVKS LGDKAFVIAT
301: DTCFSVLAHE FYGCLENAIY FTDDTMIKVF KLDNGNGSSI ETTIYPYAQS CFQMFVPSFL
101: SSGKLHLLDP LSRLPMEHSR KRVDLSEFTI TEIREAYQVH DWRTRKETRP IFKRVALVKD KEGDNQVLGI RSTGKMMYWD IKTWKAKEEG YEFSDIIVHK
201: GQTYALDSIG IVYWIRSDLK FIRFGPLVGD WTGDRRLVEC CGEFYIVERL VGESTWKRKA DDTGYEYAKT VGFKVYKFDD EQGKMMEVKS LGDKAFVIAT
301: DTCFSVLAHE FYGCLENAIY FTDDTMIKVF KLDNGNGSSI ETTIYPYAQS CFQMFVPSFL
Arabidopsis Description
AMR1Putative F-box protein At1g65770 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHX9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.