Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG34167 | Sorghum | cytosol | 18.91 | 23.03 |
| OQU88199 | Sorghum | cytosol, extracellular, plastid | 15.8 | 20.82 |
| TraesCS5B01G447400.1 | Wheat | cytosol, plastid | 23.83 | 20.4 |
| TraesCS5A01G442900.1 | Wheat | cytosol | 23.06 | 19.52 |
| TraesCSU01G057900.1 | Wheat | cytosol | 15.54 | 15.19 |
| TraesCS3A01G498000.1 | Wheat | cytosol | 15.29 | 15.01 |
| TraesCS3B01G560700.1 | Wheat | cytosol | 15.29 | 15.01 |
Protein Annotations
| EnsemblPlants:Os03t0783800-00 | EnsemblPlantsGene:Os03g0783800 | InterPro:DUF295 | PANTHER:PTHR33165 | PANTHER:PTHR33165:SF11 | PFAM:PF03478 |
| ProteinID:AAK72896.1 | ProteinID:ABF99210.1 | ProteinID:BAH92389.1 | ProteinID:BAS86704.1 | SEG:seg | UniParc:UPI000009EC92 |
| UniProt:Q10CG4 | MapMan:35.2 | : | : | : | : |
Description
Protein of unknown function DUF295 family protein. (Os03t0783800-00)
Coordinates
chr3:+:32523609..32524843
Molecular Weight (calculated)
44126.5 Da
IEP (calculated)
11.114
GRAVY (calculated)
-0.822
Length
386 amino acids
Sequence
(BLAST)
(BLAST)
001: MGYRAVCRCW RSATDDPRGA SARDPRFRPR HWAMLDEVFQ TDARLFANAA TGRFLRMDLP LLGRGRRYRL VASAPGGDLV LAEASPPARG ARPQPVHRRR
101: EARRHDALRG AAALRGRVRC PCHRRFAHPR PARRRLRQGL LRRPRQRRLL RVRGELRVRS HQAGRRRWPL RRRRRARVGG VDPGPRGHQD GAPSRRQNHK
201: HMSREPRVPL LRGGIRGGSA AHLQDGQKDR ADLQDEHGRG EGDRSLEEVK SIGGGRAIFV GATRCISINA DKFNAIDGNR IYYQERDDLT SADIYMYELE
301: SEETTKIGGA IDSLNPVFLV STEPPFSPIQ LFCSYADEAL RFRLEWEKIV QSLPERLPDD IMASMGADLM GDFEDEFEDF EYEFND
101: EARRHDALRG AAALRGRVRC PCHRRFAHPR PARRRLRQGL LRRPRQRRLL RVRGELRVRS HQAGRRRWPL RRRRRARVGG VDPGPRGHQD GAPSRRQNHK
201: HMSREPRVPL LRGGIRGGSA AHLQDGQKDR ADLQDEHGRG EGDRSLEEVK SIGGGRAIFV GATRCISINA DKFNAIDGNR IYYQERDDLT SADIYMYELE
301: SEETTKIGGA IDSLNPVFLV STEPPFSPIQ LFCSYADEAL RFRLEWEKIV QSLPERLPDD IMASMGADLM GDFEDEFEDF EYEFND
001: MGRQPCCDKV GLKKGPWTIE EDKKLINFIL TNGHCCWRAL PKLSGLLRCG KSCRLRWINY LRPDLKRGLL SEYEEQKVIN LHAQLGNRWS KIASHLPGRT
101: DNEIKNHWNT HIKKKLRKMG IDPLTHKPLS EQEASQQAQG RKKSLVPHDD KNPKQDQQTK DEQEQHQLEQ ALEKNNTSVS GDGFCIDEVP LLNPHEILID
201: ISSSHHHHSN DDNVNINTSK FTSPSSSSSS TSSCISSVVP GDEFSKFFDE MEILDLKWLS SDDSLGDDIS KDGKFNNSTV DTMNLWDIND LSSLDMFMNE
301: HDDGFIGNGN GCSRMVLDQD SWTFDLL
101: DNEIKNHWNT HIKKKLRKMG IDPLTHKPLS EQEASQQAQG RKKSLVPHDD KNPKQDQQTK DEQEQHQLEQ ALEKNNTSVS GDGFCIDEVP LLNPHEILID
201: ISSSHHHHSN DDNVNINTSK FTSPSSSSSS TSSCISSVVP GDEFSKFFDE MEILDLKWLS SDDSLGDDIS KDGKFNNSTV DTMNLWDIND LSSLDMFMNE
301: HDDGFIGNGN GCSRMVLDQD SWTFDLL
Arabidopsis Description
MYB43MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9SPG7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.