Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- endoplasmic reticulum 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU88199 | Sorghum | cytosol, extracellular, plastid | 47.95 | 51.88 |
| EES02090 | Sorghum | cytosol | 33.44 | 25.6 |
| TraesCS5A01G442900.1 | Wheat | cytosol | 32.49 | 22.59 |
| TraesCS5B01G447400.1 | Wheat | cytosol, plastid | 31.86 | 22.39 |
| Os03t0783800-00 | Rice | nucleus | 23.03 | 18.91 |
| EER98142 | Sorghum | mitochondrion | 18.3 | 17.9 |
| EER98141 | Sorghum | cytosol, mitochondrion | 23.97 | 16.81 |
| TraesCSU01G057900.1 | Wheat | cytosol | 19.24 | 15.44 |
| TraesCS3A01G498000.1 | Wheat | cytosol | 18.93 | 15.27 |
| TraesCS3B01G560700.1 | Wheat | cytosol | 18.61 | 15.01 |
Protein Annotations
| EnsemblPlants:KXG34167 | EnsemblPlantsGene:SORBI_3003G434300 | InterPro:DUF295 | PANTHER:PTHR33165 | PANTHER:PTHR33165:SF11 | PFAM:PF03478 |
| ProteinID:KXG34167 | ProteinID:KXG34167.1 | SEG:seg | UniParc:UPI00081AD11A | UniProt:A0A1B6Q8D5 | MapMan:35.2 |
Description
hypothetical protein
Coordinates
chr3:-:73605864..73607157
Molecular Weight (calculated)
35233.0 Da
IEP (calculated)
4.222
GRAVY (calculated)
-0.275
Length
317 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAQGWASLP ADLVNRVADC LLATNDLDFY TDLRAVCQHW RSVTADPRSN QHDPRFRPSR WVLLDEHKAS SSAAVHGALL FVNTATGRFL RRTLPLLRDP
101: AGHAFVTSTT GGLLLRSEEY DKDCRCYTVV TTGGDMLLAV LKRRRGMDVF KIDASGNVKE RVDSIGSLAL FLGVRCLVVD AHCFPTVEPN CAYFQLRELT
201: GLDDQPYIFK FSIGTCGNEE DEPELVSAAM AIGNDCTVSP CNTGPFTVTQ LLSNYTMDIP GEQLMWKGWY SCLELVSYIG GDDHYTDYID YVDDDDDESD
301: DDDWGSNCDP DDDWSSS
101: AGHAFVTSTT GGLLLRSEEY DKDCRCYTVV TTGGDMLLAV LKRRRGMDVF KIDASGNVKE RVDSIGSLAL FLGVRCLVVD AHCFPTVEPN CAYFQLRELT
201: GLDDQPYIFK FSIGTCGNEE DEPELVSAAM AIGNDCTVSP CNTGPFTVTQ LLSNYTMDIP GEQLMWKGWY SCLELVSYIG GDDHYTDYID YVDDDDDESD
301: DDDWGSNCDP DDDWSSS
001: MVFRESKLYV LSPSLDITVF DFSSGDSPKE CASFTSPDDY SSYGPLRFES FDHLVITLSG EVLLIKVERR GLQICSFDVY KMDQTSSKCK RIRSIGNEAL
101: FLDHGTTVEA KDGIRNNCIY FSYVKYGKYK NISLRNTCVY DIQRGFVVQR FQHLADSSPM PFKCVRWEQV RD
101: FLDHGTTVEA KDGIRNNCIY FSYVKYGKYK NISLRNTCVY DIQRGFVVQR FQHLADSSPM PFKCVRWEQV RD
Arabidopsis Description
F-box/kelch-repeat protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LT96]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.