Subcellular Localization
min:
: max
Winner_takes_all: cytosol, mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 4
- cytosol 2
- plastid 1
- extracellular 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER98142 | Sorghum | mitochondrion | 50.44 | 70.37 |
| Zm00001d019067_P001 | Maize | cytosol | 69.47 | 68.41 |
| TraesCS6B01G450800.1 | Wheat | mitochondrion | 42.26 | 43.71 |
| TraesCS6D01G389700.1 | Wheat | mitochondrion | 41.59 | 43.02 |
| KXG34167 | Sorghum | cytosol | 16.81 | 23.97 |
| EES02090 | Sorghum | cytosol | 20.35 | 22.22 |
| OQU88199 | Sorghum | cytosol, extracellular, plastid | 14.16 | 21.84 |
Protein Annotations
| EnsemblPlants:EER98141 | EnsemblPlantsGene:SORBI_3002G066000 | InterPro:DUF295 | PANTHER:PTHR33165 | PANTHER:PTHR33165:SF11 | PFAM:PF03478 |
| ProteinID:EER98141 | ProteinID:EER98141.1 | RefSeq:XP_002461620.1 | SEG:seg | UniParc:UPI0001A83C44 | UniProt:C5XBZ1 |
| MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:-:6539633..6540991
Molecular Weight (calculated)
49946.7 Da
IEP (calculated)
4.588
GRAVY (calculated)
-0.169
Length
452 amino acids
Sequence
(BLAST)
(BLAST)
001: MPCTLSTQKR AHLAHQAAPA AATPSWSTSL PQDITIKLAE RIVDDNDIDS YMAFRAVCHS WRTETTDKPG KVNDHTDPTC FQPTKWALLN KQEDHVTFLD
101: VDAGRFLHMS IPILCNYLFI GATSGGLILL GEKQEPHQAC LLNPFTGAIA HFKVRAPAEG VMVVAVTTKP LMVFVSLEDG DIIWADQSSE NFKRFNRSES
201: DKPTPIVAFN DDVYASDPHG VIFTSNVDDV PDGKKCRSAA IIYMGVTIPS HNHNASPDAS PDALAGGGGR YYLVQSGGYL LLVTRPLDGA ANEPLVRRVD
301: TKQNVLEPVS SIGSRAIFVS HVRCISIDAD KFQGIKGGCI HFVEPVILAQ DDYAPSTITT YQVAPGPQAG LIMFEQGILE GCFRPFTITQ VFADYCRSVH
401: YHELYQMIFS DWDWDFSNSE TDETSSYGSD YEALFWELEE EAEFLGINYE AE
101: VDAGRFLHMS IPILCNYLFI GATSGGLILL GEKQEPHQAC LLNPFTGAIA HFKVRAPAEG VMVVAVTTKP LMVFVSLEDG DIIWADQSSE NFKRFNRSES
201: DKPTPIVAFN DDVYASDPHG VIFTSNVDDV PDGKKCRSAA IIYMGVTIPS HNHNASPDAS PDALAGGGGR YYLVQSGGYL LLVTRPLDGA ANEPLVRRVD
301: TKQNVLEPVS SIGSRAIFVS HVRCISIDAD KFQGIKGGCI HFVEPVILAQ DDYAPSTITT YQVAPGPQAG LIMFEQGILE GCFRPFTITQ VFADYCRSVH
401: YHELYQMIFS DWDWDFSNSE TDETSSYGSD YEALFWELEE EAEFLGINYE AE
001: MGKVGWSDLH EDLIDLLANN LSSNINLLRF RSICKPWRST VATKKRLHNH FERNLPTFKK KKTVVSPSTF FRVTLPSPCR NKGWLIKNRQ VSESSKNNLL
101: SPLSGKTITP SDKTLDLLKV ECFRDSSILQ LFADSDRVVF LDNVFFVVDF KNEIWCCKSG EETRHWTRIN NEEAKGFLDI ILHKGKIYAL DLTGAIWWIS
201: LSELSIYQYG PSTPVDFYEI DNCKEKRLVE YCGELCVVHR FYKKFCVKRV LTERTVCFKV YKMDKNLVEW VEVSSLGDKA LIVATDNCFL VLASEYYGCL
301: ENAIYFNDRE DVSVFKLDDC SIITKQINSS SSSSHQSCFQ MFSTSFF
101: SPLSGKTITP SDKTLDLLKV ECFRDSSILQ LFADSDRVVF LDNVFFVVDF KNEIWCCKSG EETRHWTRIN NEEAKGFLDI ILHKGKIYAL DLTGAIWWIS
201: LSELSIYQYG PSTPVDFYEI DNCKEKRLVE YCGELCVVHR FYKKFCVKRV LTERTVCFKV YKMDKNLVEW VEVSSLGDKA LIVATDNCFL VLASEYYGCL
301: ENAIYFNDRE DVSVFKLDDC SIITKQINSS SSSSHQSCFQ MFSTSFF
Arabidopsis Description
Probable F-box protein At1g44080 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6X9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.