Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER98141 | Sorghum | cytosol, mitochondrion | 68.41 | 69.47 |
| EER98142 | Sorghum | mitochondrion | 43.14 | 61.11 |
| TraesCS6B01G450800.1 | Wheat | mitochondrion | 41.39 | 43.48 |
| TraesCS6D01G389700.1 | Wheat | mitochondrion | 38.13 | 40.05 |
| Zm00001d021115_P001 | Maize | cytosol | 22.44 | 34.11 |
| Zm00001d021099_P001 | Maize | cytosol, vacuole | 22.66 | 31.14 |
| Zm00001d021107_P001 | Maize | cytosol | 24.18 | 30.49 |
| Zm00001d021117_P001 | Maize | cytosol, plastid | 21.57 | 29.64 |
| Zm00001d021103_P001 | Maize | cytosol | 19.39 | 29.18 |
| Zm00001d021097_P001 | Maize | cytosol | 23.53 | 28.8 |
Protein Annotations
| EnsemblPlants:Zm00001d019067_P001 | EnsemblPlants:Zm00001d019067_T001 | EnsemblPlantsGene:Zm00001d019067 | InterPro:DUF295 | ncoils:Coil | PANTHER:PTHR33165 |
| PANTHER:PTHR33165:SF11 | PFAM:PF03478 | ProteinID:ONM52083.1 | SEG:seg | UniParc:UPI000221EC6C | UniProt:A0A1D6HUW0 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7:-:15031817..15033196
Molecular Weight (calculated)
50295.2 Da
IEP (calculated)
4.939
GRAVY (calculated)
-0.212
Length
459 amino acids
Sequence
(BLAST)
(BLAST)
001: MPCTLSTQKR AHLAHQTAPT AAMSYWSSSL PKDITIKLAE RMVDDNDIDC YMAFRRVCRN WRAETSDHPG KADDRTDPTR FEPTKWALLD RQEERVTFVD
101: VDAGRFLRMS VPVLRDYLFV GATSGGLIVL GEKQEPHRTR LLNPFTGAVA GFKVRAPAEG VKAAAVTTKP LMLFVSLEDG DIIWADQSSD HFKRFNRLDS
201: DKPTPIAALD GDVYASDPHG AIFTSIVDDV PDGQKCRSAA TIWMGTSIPS PNHNASPDAS PAAAAALAGS GGRYYLVQSG GDLLLVTRPL GGGVPDQPLV
301: RRVDTKQNVL EPVSSIGSRA IFVSHVRCIS IDAGKFPFEG IKAGCIYFVE PVLAARGGYE PSRITTCQVA AGLQAREIMF EEGILEGCYR PFTITQAFAE
401: YCRSVHYHEL YQMICSYWDW DFSDSESDGT SSYGSASDYE AALSELEEAA EFLGINFEA
101: VDAGRFLRMS VPVLRDYLFV GATSGGLIVL GEKQEPHRTR LLNPFTGAVA GFKVRAPAEG VKAAAVTTKP LMLFVSLEDG DIIWADQSSD HFKRFNRLDS
201: DKPTPIAALD GDVYASDPHG AIFTSIVDDV PDGQKCRSAA TIWMGTSIPS PNHNASPDAS PAAAAALAGS GGRYYLVQSG GDLLLVTRPL GGGVPDQPLV
301: RRVDTKQNVL EPVSSIGSRA IFVSHVRCIS IDAGKFPFEG IKAGCIYFVE PVLAARGGYE PSRITTCQVA AGLQAREIMF EEGILEGCYR PFTITQAFAE
401: YCRSVHYHEL YQMICSYWDW DFSDSESDGT SSYGSASDYE AALSELEEAA EFLGINFEA
001: MQAVQKAPEG TPAAGGMFVV IVHSAEDVEG KHHTNPYVHI YFKGEERKTK HVKKNKDPKW NEEFSFMLEE PPIHEKMHVK VFSTSSRIVF VLRCASVEAA
101: YVPFEGIKPR GAKLFSDGSA CSKGFGDTTS FGDMALLGGM AIMLAHHDEG VLTCHVMVRE SFEEINMAWR AWKLVRQGAG SSGSWFVRRR FVRELVRQEA
201: VRQGAGLSGS RFVKEPVRQG AGSSGVGVWP LKSQGRPSDL RFFLKSTFSS FKFHDHYKII K
101: YVPFEGIKPR GAKLFSDGSA CSKGFGDTTS FGDMALLGGM AIMLAHHDEG VLTCHVMVRE SFEEINMAWR AWKLVRQGAG SSGSWFVRRR FVRELVRQEA
201: VRQGAGLSGS RFVKEPVRQG AGSSGVGVWP LKSQGRPSDL RFFLKSTFSS FKFHDHYKII K
Arabidopsis Description
Calcium-dependent lipid-binding (CaLB domain) family protein [Source:UniProtKB/TrEMBL;Acc:Q9SKQ7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.