Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d021115_P001 | Maize | cytosol | 63.28 | 63.91 |
| Zm00001d021107_P001 | Maize | cytosol | 71.8 | 60.16 |
| Zm00001d021099_P001 | Maize | cytosol, vacuole | 62.3 | 56.89 |
| Zm00001d021117_P001 | Maize | cytosol, plastid | 51.15 | 46.71 |
| Zm00001d021097_P001 | Maize | cytosol | 55.74 | 45.33 |
| TraesCS6A01G141000.1 | Wheat | cytosol | 32.79 | 30.3 |
| TraesCS3B01G507200.1 | Wheat | cytosol | 17.7 | 29.35 |
| TraesCS1A01G095900.1 | Wheat | cytosol, plasma membrane, plastid | 29.84 | 28.35 |
| TraesCS1B01G127800.1 | Wheat | plasma membrane | 34.75 | 27.75 |
| TraesCS4D01G058600.1 | Wheat | cytosol | 36.39 | 27.54 |
| TraesCS1D01G104900.1 | Wheat | extracellular, plasma membrane, plastid | 34.1 | 27.3 |
| TraesCS4B01G058700.1 | Wheat | plastid | 39.02 | 26.86 |
| TraesCS5D01G038100.1 | Wheat | cytosol | 38.36 | 26.77 |
| TraesCS1D01G365300.1 | Wheat | cytosol | 31.8 | 26.65 |
| TraesCS3A01G497100.1 | Wheat | cytosol | 36.07 | 25.58 |
| TraesCS3A01G463800.1 | Wheat | extracellular, vacuole | 20.33 | 25.31 |
| TraesCS3A01G467500.1 | Wheat | cytosol | 29.51 | 25.28 |
| TraesCS3D01G512600.1 | Wheat | cytosol, nucleus, peroxisome | 29.84 | 25.14 |
| TraesCS3D01G458000.1 | Wheat | cytosol | 33.77 | 24.88 |
| TraesCS3B01G507400.1 | Wheat | cytosol | 32.79 | 24.81 |
| TraesCS3A01G463900.1 | Wheat | plastid | 33.77 | 24.76 |
| TraesCS3D01G458200.1 | Wheat | plastid | 33.44 | 24.52 |
| TraesCS3D01G069100.1 | Wheat | cytosol | 29.51 | 24.13 |
| TraesCS3D01G457900.1 | Wheat | plastid | 33.11 | 23.88 |
| TraesCS3D01G458900.1 | Wheat | cytosol | 31.15 | 23.75 |
| TraesCS3A01G464200.1 | Wheat | cytosol | 30.82 | 23.74 |
| TraesCS3B01G507800.1 | Wheat | cytosol, plasma membrane, plastid | 30.49 | 23.66 |
| TraesCS3A01G464300.1 | Wheat | cytosol | 30.82 | 23.5 |
| TraesCS3D01G458800.1 | Wheat | cytosol | 14.43 | 23.4 |
| TraesCS3D01G458300.1 | Wheat | cytosol | 31.15 | 23.11 |
| TraesCS2D01G343100.1 | Wheat | cytosol | 30.49 | 22.96 |
| TraesCS3D01G464100.1 | Wheat | cytosol, mitochondrion, peroxisome | 29.51 | 22.56 |
| TraesCS3B01G508400.1 | Wheat | cytosol | 26.23 | 22.35 |
| TraesCS3D01G458400.1 | Wheat | cytosol | 28.85 | 22.17 |
| TraesCS6B01G438000.1 | Wheat | cytosol, plastid | 29.18 | 21.81 |
| TraesCS3D01G459700.1 | Wheat | cytosol, plastid | 28.85 | 21.78 |
| TraesCS1B01G077100.1 | Wheat | cytosol | 30.49 | 21.73 |
| TraesCS3B01G572600.1 | Wheat | peroxisome | 22.95 | 21.47 |
| EES02090 | Sorghum | cytosol | 28.85 | 21.26 |
| TraesCS3B01G507700.1 | Wheat | endoplasmic reticulum, golgi | 29.18 | 20.75 |
| TraesCS2B01G363100.1 | Wheat | cytosol, peroxisome, plastid | 23.93 | 20.68 |
| TraesCS3A01G464100.1 | Wheat | plastid | 27.54 | 20.44 |
| TraesCS3A01G464700.1 | Wheat | cytosol | 26.56 | 20.0 |
| TraesCS3B01G585500.1 | Wheat | cytosol, mitochondrion | 19.34 | 19.6 |
| Zm00001d019067_P001 | Maize | cytosol | 29.18 | 19.39 |
| TraesCS3B01G597100.1 | Wheat | mitochondrion, plastid | 19.02 | 19.27 |
| TraesCS3D01G462200.1 | Wheat | cytosol | 27.21 | 18.65 |
| TraesCS3D01G459500.1 | Wheat | cytosol | 26.23 | 17.66 |
| TraesCS6B01G350200.1 | Wheat | cytosol | 12.46 | 10.41 |
| TraesCS6D01G298900.1 | Wheat | cytosol | 11.48 | 9.64 |
Protein Annotations
| EnsemblPlants:Zm00001d021103_P001 | EnsemblPlants:Zm00001d021103_T001 | EnsemblPlantsGene:Zm00001d021103 | InterPro:DUF295 | PANTHER:PTHR33165 | PANTHER:PTHR33165:SF11 |
| PFAM:PF03478 | ProteinID:ONM56285.1 | SEG:seg | UniParc:UPI0008435A2F | UniProt:A0A1D6I8B4 | MapMan:35.2 |
Description
No Description!
Coordinates
chr7:-:142822913..142823830
Molecular Weight (calculated)
34311.8 Da
IEP (calculated)
5.347
GRAVY (calculated)
0.009
Length
305 amino acids
Sequence
(BLAST)
(BLAST)
001: MLDEVHQSDA RLFVNAGTGR FVRRDLPLLR RYNVVASAAG GLVVLAERSA PHAARVLNPF TGAMISFVAP VPCLYDPAAH LIGSLPTLVF ISKDDSPTIY
101: WADPDSKSFV EDNEGHFTHL LVRLPFERRV YPTTLQGWLF DPSFVIDFFN HHFDGNAECP LVNKRCFQVE SAGEMLAVYL CLHGHGVDVF KIDTGSDLLD
201: RVNNLGSRAI FVGERRCLAV DADKFASVEA NCIYYVRKET SWYDVSLYRL KDETGVRAVG AIYSFGSSFL SDDPPFSDVQ LLCYYTFEVR KMFPQLQQDC
301: FFSES
101: WADPDSKSFV EDNEGHFTHL LVRLPFERRV YPTTLQGWLF DPSFVIDFFN HHFDGNAECP LVNKRCFQVE SAGEMLAVYL CLHGHGVDVF KIDTGSDLLD
201: RVNNLGSRAI FVGERRCLAV DADKFASVEA NCIYYVRKET SWYDVSLYRL KDETGVRAVG AIYSFGSSFL SDDPPFSDVQ LLCYYTFEVR KMFPQLQQDC
301: FFSES
001: MSQLLGRTAK ISSVVKKQRL CFSELRSFST AATPYLLLKD TNYRAASGGS VVDINLYDPR KKEIVKIRDQ YLSEELQCTM KMGSSRGWIV AKTIYEPTLY
101: LTNIFNPCAS VSSHKVFNLP PLEDDAKARI SSISLSASPN QQDCVLAVKS SSSPFLSLWR PGDSAWTRIK VPFPASNVMM YSGRDRKFYL LPRESKEECE
201: GPIDLINTSS DDFPQVTLYQ RFPNSDIPVS RQEQLLSSIK TRYLVESPSG DSFIVYWCNE RSFYWKKGEV KPWTGKNPPP SRISCRLKTR TFVVFRQDSE
301: QGIGSYTEDI GDLCIFLGHR EAFCVSATEY PGLRPNSVYY ATSGTGFGYY DLSSNTLHDV IHEGLFSWIA PLQ
101: LTNIFNPCAS VSSHKVFNLP PLEDDAKARI SSISLSASPN QQDCVLAVKS SSSPFLSLWR PGDSAWTRIK VPFPASNVMM YSGRDRKFYL LPRESKEECE
201: GPIDLINTSS DDFPQVTLYQ RFPNSDIPVS RQEQLLSSIK TRYLVESPSG DSFIVYWCNE RSFYWKKGEV KPWTGKNPPP SRISCRLKTR TFVVFRQDSE
301: QGIGSYTEDI GDLCIFLGHR EAFCVSATEY PGLRPNSVYY ATSGTGFGYY DLSSNTLHDV IHEGLFSWIA PLQ
Arabidopsis Description
At5g03390 [Source:UniProtKB/TrEMBL;Acc:Q9LZF0]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.