Factsheet for TraesCS6D01G298900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G350200.1	Wheat	cytosol	92.29	91.78
TraesCS7D01G325400.1	Wheat	cytosol, mitochondrion	23.42	23.35
TraesCS5D01G357400.1	Wheat	plastid	20.66	20.83
TraesCS3D01G494300.1	Wheat	cytosol	25.07	19.28
Zm00001d021115_P001	Maize	cytosol	14.05	16.89
TraesCS3D01G458400.1	Wheat	cytosol	17.36	15.87
Zm00001d021099_P001	Maize	cytosol, vacuole	14.6	15.87
Zm00001d021117_P001	Maize	cytosol, plastid	14.33	15.57
TraesCS2D01G343100.1	Wheat	cytosol	17.36	15.56
TraesCS1D01G092000.1	Wheat	cytosol	15.15	15.49
TraesCS1D01G104900.1	Wheat	extracellular, plasma membrane, plastid	16.25	15.49
TraesCS3D01G504700.1	Wheat	cytosol	15.15	14.99
Zm00001d021097_P001	Maize	cytosol	15.43	14.93
Zm00001d021107_P001	Maize	cytosol	14.6	14.56
TraesCS3D01G458300.1	Wheat	cytosol	16.25	14.36
TraesCS3D01G464100.1	Wheat	cytosol, mitochondrion, peroxisome	15.7	14.29
TraesCS1D01G365300.1	Wheat	cytosol	14.33	14.29
TraesCS3D01G458900.1	Wheat	cytosol	15.43	14.0
TraesCS3D01G458200.1	Wheat	plastid	15.7	13.7
TraesCS3D01G504800.1	Wheat	cytosol	15.15	13.51
TraesCS3D01G459700.1	Wheat	cytosol, plastid	14.6	13.12
TraesCS3D01G458000.1	Wheat	cytosol	14.6	12.8
TraesCS6D01G389700.1	Wheat	mitochondrion	15.15	12.59
TraesCS3D01G069100.1	Wheat	cytosol	12.67	12.33
TraesCS3D01G512600.1	Wheat	cytosol, nucleus, peroxisome	12.12	12.15
TraesCS3D01G462200.1	Wheat	cytosol	14.88	12.13
TraesCS5D01G038100.1	Wheat	cytosol	14.6	12.13
EES02090	Sorghum	cytosol	13.5	11.84
TraesCS3D01G457900.1	Wheat	plastid	13.77	11.82
TraesCS3D01G459500.1	Wheat	cytosol	14.6	11.7
Zm00001d021103_P001	Maize	cytosol	9.64	11.48
TraesCS4D01G058600.1	Wheat	cytosol	12.4	11.17
TraesCS3D01G458800.1	Wheat	cytosol	4.96	9.57

Protein Annotations

EnsemblPlants:TraesCS6D01G298900.1	EnsemblPlantsGene:TraesCS6D01G298900	InterPro:DUF295	InterPro:Gal_Oxase/kelch_b-propeller	PANTHER:PTHR33165	PANTHER:PTHR33165:SF11
PFAM:PF03478	SEG:seg	SUPFAM:SSF50965	TMHMM:TMhelix	MapMan:35.2	:

Description

No Description!

Coordinates

chr6D:+:409524831..409525922

Molecular Weight (calculated)

41157.0 Da

IEP (calculated)

8.251

GRAVY (calculated)

0.068

Length

363 amino acids

Sequence
(BLAST)

001: MSRWQSAPAD IICDIGDSLL DSNCHDSYVA MRYVCSLWKS AISSYQRLFL RAHRWIVLEE INEFGDCTVH RVFVNLSTGR MVKRRIPLLN DHVYVGSSDG
101: LLILVEKNEP YFVKLWEPFT GYLVQFTAGI IHQQPSHFAV ETRGVPRLFH APGGLRNPRV MCYDVNNGNL EVRFGDMPVE RVASMTAYKS DVFVLFHNRQ
201: LFKITGDGHE MHGEFILIHE APALAPSAMT HYLVVSGGGN LLILVIGIAE ILIFCVDVEL RTAVRIYNIG SQALFLSNTR CISVNAESFP TVRENCVYQA
301: CISGYSGPCG TYEFSLMRPR KRKIYHQSFV NDVTYTLGGR PLSMCPVLIH YCLFRNKCRR PLS

Best Arabidopsis Sequence Match ( AT3G22337.1 )
(BLAST)

001: MVFRESKLYV LSPSLDITVF DFSSGDSPKE CASFTSPDDY SSYGPLRFES FDHLVITLSG EVLLIKVERR GLQICSFDVY KMDQTSSKCK RIRSIGNEAL
101: FLDHGTTVEA KDGIRNNCIY FSYVKYGKYK NISLRNTCVY DIQRGFVVQR FQHLADSSPM PFKCVRWEQV RD

Arabidopsis Description

F-box/kelch-repeat protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LT96]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.