Factsheet for TraesCS5D01G038100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G365300.1	Wheat	cytosol	48.28	57.97
Zm00001d021115_P001	Maize	cytosol	31.58	45.7
TraesCS4D01G058600.1	Wheat	cytosol	39.59	42.93
Zm00001d021117_P001	Maize	cytosol, plastid	32.72	42.81
TraesCS3D01G069100.1	Wheat	cytosol	35.7	41.82
Zm00001d021107_P001	Maize	cytosol	34.78	41.76
Zm00001d021097_P001	Maize	cytosol	35.47	41.33
Zm00001d021099_P001	Maize	cytosol, vacuole	31.35	41.02
TraesCS3D01G458200.1	Wheat	plastid	38.22	40.14
TraesCS1D01G104900.1	Wheat	extracellular, plasma membrane, plastid	34.1	39.11
TraesCS3D01G458000.1	Wheat	cytosol	36.84	38.89
TraesCS3D01G512600.1	Wheat	cytosol, nucleus, peroxisome	31.81	38.4
Zm00001d021103_P001	Maize	cytosol	26.77	38.36
TraesCS3D01G464100.1	Wheat	cytosol, mitochondrion, peroxisome	35.01	38.35
TraesCS3D01G458900.1	Wheat	cytosol	34.78	38.0
TraesCS3D01G459700.1	Wheat	cytosol, plastid	34.55	37.38
TraesCS3D01G457900.1	Wheat	plastid	36.16	37.35
TraesCS3D01G458400.1	Wheat	cytosol	32.72	36.02
TraesCS3D01G458300.1	Wheat	cytosol	32.49	34.55
TraesCS2D01G343100.1	Wheat	cytosol	31.81	34.32
TraesCS3D01G462200.1	Wheat	cytosol	33.87	33.26
TraesCS3D01G459500.1	Wheat	cytosol	33.41	32.23
TraesCS1D01G092000.1	Wheat	cytosol	25.63	31.55
EES02090	Sorghum	cytosol	28.15	29.71
TraesCS3D01G458800.1	Wheat	cytosol	11.67	27.13
TraesCS3D01G504700.1	Wheat	cytosol	22.2	26.43
TraesCS3D01G504800.1	Wheat	cytosol	23.57	25.31
TraesCS6D01G389700.1	Wheat	mitochondrion	23.11	23.11
TraesCS7D01G325400.1	Wheat	cytosol, mitochondrion	15.79	18.96
TraesCS5D01G357400.1	Wheat	plastid	15.56	18.89
TraesCS3D01G494300.1	Wheat	cytosol	19.91	18.43
TraesCS6D01G298900.1	Wheat	cytosol	12.13	14.6

Protein Annotations

EnsemblPlants:TraesCS5D01G038100.1	EnsemblPlantsGene:TraesCS5D01G038100	Gene3D:1.20.1280.50	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:DUF295	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	InterPro:IPR001810	PANTHER:PTHR33165	PANTHER:PTHR33165:SF11
PFAM:PF00646	PFAM:PF03478	SEG:seg	SUPFAM:SSF81383	MapMan:35.2	:

Description

No Description!

Coordinates

chr5D:+:37138815..37140128

Molecular Weight (calculated)

49035.0 Da

IEP (calculated)

5.062

GRAVY (calculated)

0.006

Length

437 amino acids

Sequence
(BLAST)

001: MSNLSSIKPA MADWSSLPPE LVRRIADRLL DTNDLDLYMC LRAVCPSWRS ATDDPKNSSE LRFRPCRWIV IDELFDVGSD SRLLVNTLSG RIVRLDLPLL
101: RRYCFVATTH GGLFVLADKK PPHPAVVLNP FTGHMIRFKA PVPCYRGPAA AALSGLFALS LTSADLRSSP TLILVWDSGC GQYMAAPDTD DFCRDLDGEE
201: IIEAMSSFFL MPFAIAGGIY AADGWQGRVA PLPVALAAKI FRVMRLLHID PYRMYVDKVF MGFADRSWTG DANRFFLVES AGELLAIENV QPHLKIFRLD
301: TDSDELEPVE SIGSRAIFIG YRRCVSVSAD KFPSVVSNCI YYIKCTDSSH DIYQYDLKTK KEERVCEAID PLTPTIIMQP FLHPIRPTFA KPPFTILQLL
401: SSYTVNARES QLEMETFVQD LLPGAFPDDG SYFDEHD

Best Arabidopsis Sequence Match ( AT4G25930.1 )
(BLAST)

001: MSQLINRLLK PSVCKNVIRS HSKQVRMFSS KPTYPYLLID HLLKTTEHCS NDQVYYDDKY YEKNLVIKDQ GLAEEVREVM TVGFSHKDDW RVHLEKSEDS
101: STSLMMVSNT SFVPVKHQLP PLSSNCRIQN VAISNSVDIK KEDLVVAVKF FGSDVSLCKP FSDSSSEWIN INTSGSVHPF SSLTYSKKNK KFLSVSPSGT
201: YLWYLDLHFD EDDVEPYSSY LYFREDPLLR LYKMDLEDYI WRFRTDHLAE LPSGEHFLVK WFFKDVMMNV GKITQKTDGF KVFRVDTICG HLTNTQDIGD
301: LCIFLGHGEA YCVPASSSPG LRPNSIYYVG CNFGVHDIAT DTTTNFYTHS NVPLRSTEFP YWPLPLS

Arabidopsis Description

Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q1PE50]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.