Factsheet for TraesCS3D01G504800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G504700.1	Wheat	cytosol	83.29	92.37
TraesCS3B01G560000.1	Wheat	cytosol	90.42	91.32
TraesCS3B01G559900.1	Wheat	cytosol	88.94	89.6
TraesCS6D01G389700.1	Wheat	mitochondrion	32.19	29.98
TraesCS3D01G069100.1	Wheat	cytosol	24.08	26.27
TraesCS3D01G512600.1	Wheat	cytosol, nucleus, peroxisome	22.36	25.14
TraesCS4D01G058600.1	Wheat	cytosol	24.57	24.81
TraesCS1D01G365300.1	Wheat	cytosol	21.87	24.45
TraesCS3D01G458000.1	Wheat	cytosol	24.82	24.4
TraesCS3D01G458900.1	Wheat	cytosol	23.83	24.25
TraesCS3D01G464100.1	Wheat	cytosol, mitochondrion, peroxisome	23.34	23.81
TraesCS3D01G458400.1	Wheat	cytosol	23.1	23.68
TraesCS3D01G457900.1	Wheat	plastid	24.57	23.64
TraesCS5D01G038100.1	Wheat	cytosol	25.31	23.57
TraesCS3D01G458200.1	Wheat	plastid	24.08	23.56
TraesCS1D01G092000.1	Wheat	cytosol	19.9	22.82
TraesCS3D01G459700.1	Wheat	cytosol, plastid	22.6	22.77
TraesCS3D01G458300.1	Wheat	cytosol	22.85	22.63
TraesCS1D01G104900.1	Wheat	extracellular, plasma membrane, plastid	20.64	22.05
TraesCS3D01G458800.1	Wheat	cytosol	9.58	20.74
TraesCS3D01G459500.1	Wheat	cytosol	22.36	20.09
TraesCS2D01G343100.1	Wheat	cytosol	19.66	19.75
TraesCS3D01G462200.1	Wheat	cytosol	20.88	19.1
TraesCS5D01G357400.1	Wheat	plastid	16.71	18.89
TraesCS6D01G298900.1	Wheat	cytosol	13.51	15.15
TraesCS7D01G325400.1	Wheat	cytosol, mitochondrion	13.02	14.56
TraesCS3D01G494300.1	Wheat	cytosol	14.25	12.29

Protein Annotations

EnsemblPlants:TraesCS3D01G504800.1

EnsemblPlantsGene:TraesCS3D01G504800

PANTHER:PTHR33165

PANTHER:PTHR33165:SF11

SEG:seg

MapMan:35.2

Description

No Description!

Coordinates

chr3D:-:592321231..592322803

Molecular Weight (calculated)

45988.5 Da

IEP (calculated)

6.186

GRAVY (calculated)

-0.250

Length

407 amino acids

Sequence
(BLAST)

001: MADLVFWKNL PYDITRKISE SFLATDDIDH YVAFRAVCAN WRRATESTAD ATDPKFMPSK WIMLEHSIHD NDRVAFFNLS TGRLLRKKIL TEVRSRRYFF
101: VGVTKGGLFM LGQRAQPYQT RVLNPFTGAI ARFKVPIPIE QVSSVVVTTS PMMVFISDLL NNCVSWADQT SEEWHPALGF GEGEFRNGDW GFGNRHKNLT
201: SFAGGMYMTN KYGSIISTIT DVYKEGNQWK RSAGTISMFT TIVGPNFELA HGSNNFYLVE SEGELLLVMD GRVCNGMPVV YSLDTVNKVL VPVRSIGSRV
301: LFVSSRRCLS VDTTKSNKFH SIESGTIYYA DRSVVRAYDQ GSLAGSGWEE EPKYVFESAT NPFSKMAELL VNYCTTIEYS ELQMLPPYGE EGYTYYEYGD
401: PSDKSTE

Best Arabidopsis Sequence Match ( AT2G17030.1 )
(BLAST)

001: MVDWSTLPKD LLDLISKSLE SSFDLIQFRS VCSSWRSAAE PKSPLPTHHL PILPDNGGSL FPDSAVGFRL SQRSILLIKP HEPCIESDSF GWLIKVEEDL
101: NVPRKVTLLD PLCDTRNSIP ENFPRVLDMS KFKVRELGRE FKLHYFNTVG DIVESLYLEK AVVKYLDCDG DYKFVLLTIH VSGKLAVFRS WDRAWTVIND
201: MPSPYDDVML FDGRFFAVDN NGRTVVVDYS SLKLTLVASP VFGGDKKFLI ESCGEMLLVD MYLSLEAVEG DPGFVEEIFE HPAFYMNERT VKFKVYRFVE
301: REESWVDVYD LEDKMLFLGD DSTFSASASD ILPLCDGSSV FFNGNVFNGE DLGAMQDRDL GVFDFRSGKI ELVQKLPEYA KLFWPPPPWI TSHARAEDHI
401: GETSSQS

Arabidopsis Description

SKIP23F-box protein SKIP23 [Source:UniProtKB/Swiss-Prot;Acc:Q3EBZ2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.