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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol, mitochondrion

Predictor Summary:
  • nucleus 1
  • mitochondrion 4
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3D01G494300.1 Wheat cytosol 77.2 59.53
TraesCS5D01G357400.1 Wheat plastid 25.82 26.11
TraesCS6D01G298900.1 Wheat cytosol 23.35 23.42
TraesCS1D01G104900.1 Wheat extracellular, plasma membrane, plastid 18.13 17.32
TraesCS1D01G365300.1 Wheat cytosol 17.03 17.03
TraesCS3D01G512600.1 Wheat cytosol, nucleus, peroxisome 15.93 16.02
TraesCS5D01G038100.1 Wheat cytosol 18.96 15.79
TraesCS1D01G092000.1 Wheat cytosol 15.38 15.77
TraesCS4D01G058600.1 Wheat cytosol 17.31 15.63
TraesCS3D01G069100.1 Wheat cytosol 15.93 15.55
TraesCS3D01G458900.1 Wheat cytosol 17.03 15.5
TraesCS3D01G457900.1 Wheat plastid 17.86 15.37
TraesCS3D01G458400.1 Wheat cytosol 16.48 15.11
TraesCS2D01G343100.1 Wheat cytosol 16.76 15.06
TraesCS3D01G458200.1 Wheat plastid 17.03 14.9
TraesCS3D01G464100.1 Wheat cytosol, mitochondrion, peroxisome 16.21 14.79
TraesCS3D01G504700.1 Wheat cytosol 14.84 14.71
TraesCS3D01G458000.1 Wheat cytosol 15.93 14.01
TraesCS3D01G458300.1 Wheat cytosol 15.38 13.63
TraesCS3D01G459700.1 Wheat cytosol, plastid 14.84 13.37
TraesCS6D01G389700.1 Wheat mitochondrion 15.66 13.04
TraesCS3D01G459500.1 Wheat cytosol 16.21 13.02
TraesCS3D01G504800.1 Wheat cytosol 14.56 13.02
TraesCS3D01G462200.1 Wheat cytosol 14.56 11.91
TraesCS3D01G458800.1 Wheat cytosol 5.49 10.64
Protein Annotations
EnsemblPlants:TraesCS7D01G325400.1EnsemblPlantsGene:TraesCS7D01G325400InterPro:DUF295PANTHER:PTHR33165PFAM:PF03478SEG:seg
MapMan:35.2:::::
Description
No Description!
Coordinates
chr7D:-:415745241..415746335
Molecular Weight (calculated)
40581.2 Da
IEP (calculated)
4.312
GRAVY (calculated)
-0.133
Length
364 amino acids
Sequence
(BLAST)
001: MDMRAVCSTW RSAIAKPSPL AAVAGLRFRP RHWVMLDLQP DDRNDDDDAR LFLHVPTGRI RRLHLPVLRD NFVAGATDGL LVRGDMYPPH LARVLNPFTG
101: DMLHFPAALP RHFKHTSVKG GSHSTLVLLR WGSVVCAAPN SDFFTETEEA VETYLVSIVN YQGDVYCADA RGCVFKLVAP AADQCDDDEL LVIPEVSPPG
201: VDVYAEEGDD DDDTKEGDDG SEMPSYLVES AGELLLVRYV DETLKVFRVD VEHKLLEEVK SLGGRTLFLG QERCVSVDAA KLPSVDGDCI YMLDFENVSM
301: SDSEDMSMSD SEDMPILDSG DKCDMCVYNL RGDMVDIIYS KDFRARPFSL VQVLLWYCDV LPKL
Best Arabidopsis Sequence Match ( AT2G16290.1 )
(BLAST)
001: MADWSLLPND LLELIVGHLE TSFEIVLFRS VCRSWRSVVP PLDHSRCLGI KTHDISFNAG FTFSDQPTDQ PPFKSSVDCT LKNIPIYLVK FWTPYGDDYL
101: IAEMREREGG EPKLLLSPLS SNRIIYGMGI NKVLFNSLTS PIIPFGQYYE ITYFKKQPIR YRYGLPYHLW NEVEWVETSE RVEFLRLHSE DSRDFAVLFA
201: GRMCNLVMYR SRNMSWTQVV EHPETYAYQD LVAFKGKFYA LDSSGRGRVF VVELSLRVTE IPSVKGSQYC SKESLVQLGE ELLLVQRFIP AGRRYDEYIY
301: TWFKVFRLDE EGGKRKWVQV NYLNDRVIFL GARTKLCCSV HKLPGANENC IVFLASNDGS IFDNDSVLLF DLKTRRTNTA FNECKGYMGV FGANLKSLVS
401: CGLVTIPNPT TRFLL
Arabidopsis Description
Putative F-box protein At2g16290 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIX0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.