Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G507200.1 | Wheat | cytosol | 34.52 | 79.35 |
| TraesCS3A01G463800.1 | Wheat | extracellular, vacuole | 37.12 | 64.08 |
| TraesCS3D01G458200.1 | Wheat | plastid | 55.08 | 56.01 |
| TraesCS3D01G458000.1 | Wheat | cytosol | 54.61 | 55.8 |
| TraesCS3D01G458900.1 | Wheat | cytosol | 45.39 | 48.0 |
| Zm00001d021115_P001 | Maize | cytosol | 33.1 | 46.36 |
| TraesCS3D01G458400.1 | Wheat | cytosol | 42.79 | 45.59 |
| TraesCS3D01G464100.1 | Wheat | cytosol, mitochondrion, peroxisome | 41.37 | 43.86 |
| TraesCS3D01G459700.1 | Wheat | cytosol, plastid | 41.84 | 43.81 |
| Zm00001d021099_P001 | Maize | cytosol, vacuole | 33.1 | 41.92 |
| TraesCS3D01G458300.1 | Wheat | cytosol | 40.19 | 41.36 |
| Zm00001d021097_P001 | Maize | cytosol | 36.64 | 41.33 |
| Zm00001d021117_P001 | Maize | cytosol, plastid | 32.39 | 41.02 |
| TraesCS2D01G343100.1 | Wheat | cytosol | 38.77 | 40.49 |
| Zm00001d021107_P001 | Maize | cytosol | 34.52 | 40.11 |
| TraesCS4D01G058600.1 | Wheat | cytosol | 36.88 | 38.71 |
| TraesCS3D01G458800.1 | Wheat | cytosol | 17.02 | 38.3 |
| TraesCS3D01G459500.1 | Wheat | cytosol | 40.19 | 37.53 |
| TraesCS3D01G462200.1 | Wheat | cytosol | 39.24 | 37.3 |
| TraesCS1D01G365300.1 | Wheat | cytosol | 31.68 | 36.81 |
| TraesCS5D01G038100.1 | Wheat | cytosol | 37.35 | 36.16 |
| TraesCS3D01G069100.1 | Wheat | cytosol | 31.68 | 35.92 |
| TraesCS3D01G512600.1 | Wheat | cytosol, nucleus, peroxisome | 30.73 | 35.91 |
| Zm00001d021103_P001 | Maize | cytosol | 23.88 | 33.11 |
| TraesCS1D01G104900.1 | Wheat | extracellular, plasma membrane, plastid | 29.31 | 32.55 |
| TraesCS1D01G092000.1 | Wheat | cytosol | 25.3 | 30.14 |
| EES02090 | Sorghum | cytosol | 28.84 | 29.47 |
| TraesCS3D01G504700.1 | Wheat | cytosol | 24.35 | 28.07 |
| TraesCS3D01G504800.1 | Wheat | cytosol | 23.64 | 24.57 |
| TraesCS6D01G389700.1 | Wheat | mitochondrion | 21.51 | 20.82 |
| TraesCS5D01G357400.1 | Wheat | plastid | 16.55 | 19.44 |
| TraesCS3D01G494300.1 | Wheat | cytosol | 20.09 | 18.01 |
| TraesCS7D01G325400.1 | Wheat | cytosol, mitochondrion | 15.37 | 17.86 |
| TraesCS6D01G298900.1 | Wheat | cytosol | 11.82 | 13.77 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G457900.1 | EnsemblPlantsGene:TraesCS3D01G457900 | InterPro:DUF295 | PANTHER:PTHR33165 | PANTHER:PTHR33165:SF11 | PFAM:PF03478 |
| SEG:seg | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr3D:-:563434327..563436421
Molecular Weight (calculated)
46805.2 Da
IEP (calculated)
8.662
GRAVY (calculated)
-0.157
Length
423 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAPARPRA PSAATVAPPA KRKKKGPPSR LRALPVLPAA GWSALPPDLV RRVADCLLAT NDLDCYMDFR AVCSGWRDAT DDPRSDPSDP RFRPRRWVIL
101: LDEGFQLQSD ADGVDGGGEL LLLLNAATGR FIRKRLPLLR RYYVVATTLG GLFVLADRNP SHAARVFNPL TGVLVRFAAP VPAEKELSAF VKSDSSGFWP
201: LLGLLCASSR RPCVAGPDDE SFFYGGYKAK EYPNYNSARM AVAGGLYTND GTTGFVAKSE GWFPKICDLI HVNPHQEDVW RFLVELGGQV LIVVRLRGRV
301: KVFKYDDAEP VPVESVGRHA IFVGHHRCLA VDADRFPSVE ADCIYYIDRR GLSAHICMYS LRDEKEERVS GGAVDFVKPH KLFVLVADRP FTVIQLLCNY
401: TINARDSQLP LKEDADNFDK KGF
101: LDEGFQLQSD ADGVDGGGEL LLLLNAATGR FIRKRLPLLR RYYVVATTLG GLFVLADRNP SHAARVFNPL TGVLVRFAAP VPAEKELSAF VKSDSSGFWP
201: LLGLLCASSR RPCVAGPDDE SFFYGGYKAK EYPNYNSARM AVAGGLYTND GTTGFVAKSE GWFPKICDLI HVNPHQEDVW RFLVELGGQV LIVVRLRGRV
301: KVFKYDDAEP VPVESVGRHA IFVGHHRCLA VDADRFPSVE ADCIYYIDRR GLSAHICMYS LRDEKEERVS GGAVDFVKPH KLFVLVADRP FTVIQLLCNY
401: TINARDSQLP LKEDADNFDK KGF
001: MDWATLPKDL LDLISKCLES SFDLIQFRSV CSSWRSAAGP KRLLWAHNLP FFPSDDKPFL SNVILRVAHQ SILLIKPNEP QCEADLFGWI VKVWDNIYVS
101: RKMTLLKPLS SSRNYFPQHL PRIFDMSKFT VRELCREVKL YHPDYYCVPG HTALELELGK TVVKYLNDDK FVLLTILEYG KLAVFRSWDR EWTVINDYIP
201: SRCQDLIMFD GRFFAIDYNG RTVVVDYSSF KLTLAANPLI GGGDKKFLIE SCGEMFLVDI EFCLNEKPEF TGGFYSYFNE TTVSYKFKFF KLVEREKRWV
301: EVEDLGDKMF FLGDDSTFSA STADIIPRCV GTGSFVFFYT HEESLVVMDD RNLGVFDFRS GKTELVNKLP EYAKLFWPPP PWITTSHESV ENYTGETSSQ
401: SQS
101: RKMTLLKPLS SSRNYFPQHL PRIFDMSKFT VRELCREVKL YHPDYYCVPG HTALELELGK TVVKYLNDDK FVLLTILEYG KLAVFRSWDR EWTVINDYIP
201: SRCQDLIMFD GRFFAIDYNG RTVVVDYSSF KLTLAANPLI GGGDKKFLIE SCGEMFLVDI EFCLNEKPEF TGGFYSYFNE TTVSYKFKFF KLVEREKRWV
301: EVEDLGDKMF FLGDDSTFSA STADIIPRCV GTGSFVFFYT HEESLVVMDD RNLGVFDFRS GKTELVNKLP EYAKLFWPPP PWITTSHESV ENYTGETSSQ
401: SQS
Arabidopsis Description
F-box protein At2g17036 [Source:UniProtKB/Swiss-Prot;Acc:Q6DR20]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.