Factsheet for TraesCS3D01G512600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, nucleus, peroxisome

Predictor Summary:

nucleus 1
peroxisome 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, nucleus, peroxisome
MultiLoc:	nucleus
PProwler:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G572600.1	Wheat	peroxisome	74.86	83.13
TraesCS3D01G069100.1	Wheat	cytosol	51.1	49.6
Zm00001d021115_P001	Maize	cytosol	33.98	40.73
Zm00001d021099_P001	Maize	cytosol, vacuole	33.7	36.53
Zm00001d021097_P001	Maize	cytosol	37.29	36.0
Zm00001d021107_P001	Maize	cytosol	35.91	35.71
Zm00001d021117_P001	Maize	cytosol, plastid	32.87	35.63
TraesCS4D01G058600.1	Wheat	cytosol	38.4	34.49
TraesCS3D01G458000.1	Wheat	cytosol	36.46	31.88
TraesCS5D01G038100.1	Wheat	cytosol	38.4	31.81
TraesCS1D01G365300.1	Wheat	cytosol	31.77	31.59
TraesCS1D01G104900.1	Wheat	extracellular, plasma membrane, plastid	32.87	31.23
TraesCS3D01G464100.1	Wheat	cytosol, mitochondrion, peroxisome	34.25	31.08
TraesCS3D01G458200.1	Wheat	plastid	35.64	31.01
TraesCS3D01G458900.1	Wheat	cytosol	34.25	31.0
TraesCS3D01G457900.1	Wheat	plastid	35.91	30.73
Zm00001d021103_P001	Maize	cytosol	25.14	29.84
TraesCS3D01G459700.1	Wheat	cytosol, plastid	32.6	29.21
TraesCS3D01G458400.1	Wheat	cytosol	31.77	28.97
TraesCS1D01G092000.1	Wheat	cytosol	28.18	28.73
TraesCS2D01G343100.1	Wheat	cytosol	30.39	27.16
TraesCS3D01G458300.1	Wheat	cytosol	30.11	26.52
TraesCS3D01G459500.1	Wheat	cytosol	33.15	26.49
TraesCS3D01G462200.1	Wheat	cytosol	30.94	25.17
TraesCS3D01G504700.1	Wheat	cytosol	25.14	24.8
TraesCS3D01G458800.1	Wheat	cytosol	12.71	24.47
EES02090	Sorghum	cytosol	27.07	23.67
TraesCS3D01G504800.1	Wheat	cytosol	25.14	22.36
TraesCS6D01G389700.1	Wheat	mitochondrion	24.59	20.37
TraesCS5D01G357400.1	Wheat	plastid	16.02	16.11
TraesCS7D01G325400.1	Wheat	cytosol, mitochondrion	16.02	15.93
TraesCS3D01G494300.1	Wheat	cytosol	20.72	15.89
TraesCS6D01G298900.1	Wheat	cytosol	12.15	12.12

Protein Annotations

EnsemblPlants:TraesCS3D01G512600.1	EnsemblPlantsGene:TraesCS3D01G512600	Gene3D:1.20.1280.50	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:DUF295	InterPro:Mu-type_HTH	PANTHER:PTHR33165	PANTHER:PTHR33165:SF11	PFAM:PF03478
PFscan:PS51702	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr3D:-:597069837..597070925

Molecular Weight (calculated)

41695.1 Da

IEP (calculated)

6.715

GRAVY (calculated)

-0.156

Length

362 amino acids

Sequence
(BLAST)

001: MEFLAADWSS LPADLLNRIA DRFLATSDVD YYMDFRAVCR RWRSTTQDPK NSPDPRFHPR HWVNINGASC RSNTRLLVNT ATGRTLRQEL GLLRHFNIIS
101: TTTDGLLALM DCTPPHNTCV LNPFTGYLIR FMAQRPGELV EYAALESGSP PTIFFFCKDY MDDNWVIHES SRKVYMAQPD SESLAIYEDR CAFPLIRLAA
201: SGIYTIGGAD LGSLTRRIFD LMRFYMADLA EISDNDYTIM SDEKSLWKLC VGRCFLTESA GKVLIIMKLA HGVVVYRLHT HNYKLEHVED IGNCAIFLDL
301: YCWCLCVNAD KFPSVHANCV YYQKSRLAVA NYMCMYNLKS EREERVDEKF EHLLLDQRLS RL

Best Arabidopsis Sequence Match ( AT2G26160.1 )
(BLAST)

001: MEKPEWSELP GDLINLTANR FSSISDVLRV RSICKPWRSA AATPKSFQCN LPSSNKMIET VLSPTTFFRV TGPSSCSYKG WLIRTKQVSE SSKINLLSPF
101: FRQLLTPSQQ TLDLLKFEVS EIRQSYEIHI FDKYLIQGVI GKEGPSHILS RVVFLDNLIF AVGQDDKIWC CKSGEESSRI WTKIKNQVED FLDIILHKGQ
201: VYALDLTGAI WWISLSPLSL LQFTPSIPMD YDGYDSCNKR LVEYCGDLCI IHQLRLKKAY IRRSQRTVGF KVYKMDEYVA KWVEVRSLGD KALIVARDSC
301: FTVVASEYHG CLNNSIYFVD NVRKSVIRMK L

Arabidopsis Description

F-box protein At2g26160 [Source:UniProtKB/Swiss-Prot;Acc:Q1PEZ8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.