Factsheet for TraesCS3D01G458400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G343100.1	Wheat	cytosol	56.93	55.8
TraesCS3D01G458300.1	Wheat	cytosol	53.4	51.58
TraesCS3D01G459700.1	Wheat	cytosol, plastid	47.86	47.03
TraesCS3D01G464100.1	Wheat	cytosol, mitochondrion, peroxisome	46.1	45.86
TraesCS3D01G458200.1	Wheat	plastid	47.61	45.43
TraesCS3D01G458000.1	Wheat	cytosol	47.1	45.17
TraesCS3A01G464100.1	Wheat	plastid	46.35	44.77
TraesCS3D01G458900.1	Wheat	cytosol	44.08	43.75
TraesCS3D01G457900.1	Wheat	plastid	45.59	42.79
Zm00001d021115_P001	Maize	cytosol	30.48	40.07
TraesCS3D01G459500.1	Wheat	cytosol	45.59	39.96
Zm00001d021117_P001	Maize	cytosol, plastid	31.49	37.43
TraesCS3D01G462200.1	Wheat	cytosol	41.06	36.63
Zm00001d021097_P001	Maize	cytosol	33.75	35.73
TraesCS1D01G365300.1	Wheat	cytosol	32.75	35.71
Zm00001d021099_P001	Maize	cytosol, vacuole	29.72	35.33
Zm00001d021107_P001	Maize	cytosol	31.99	34.89
TraesCS4D01G058600.1	Wheat	cytosol	34.26	33.75
TraesCS3D01G069100.1	Wheat	cytosol	30.98	32.98
TraesCS1D01G104900.1	Wheat	extracellular, plasma membrane, plastid	31.49	32.81
TraesCS5D01G038100.1	Wheat	cytosol	36.02	32.72
TraesCS3D01G458800.1	Wheat	cytosol	15.37	32.45
TraesCS3D01G512600.1	Wheat	cytosol, nucleus, peroxisome	28.97	31.77
TraesCS1D01G092000.1	Wheat	cytosol	27.71	30.99
Zm00001d021103_P001	Maize	cytosol	22.17	28.85
EES02090	Sorghum	cytosol	29.22	28.02
TraesCS3D01G504700.1	Wheat	cytosol	23.17	25.07
TraesCS3D01G504800.1	Wheat	cytosol	23.68	23.1
TraesCS6D01G389700.1	Wheat	mitochondrion	22.92	20.82
TraesCS5D01G357400.1	Wheat	plastid	17.63	19.44
TraesCS6D01G298900.1	Wheat	cytosol	15.87	17.36
TraesCS3D01G494300.1	Wheat	cytosol	20.4	17.16
TraesCS7D01G325400.1	Wheat	cytosol, mitochondrion	15.11	16.48

Protein Annotations

EnsemblPlants:TraesCS3D01G458400.1	EnsemblPlantsGene:TraesCS3D01G458400	InterPro:DUF295	PANTHER:PTHR33165	PANTHER:PTHR33165:SF11	PFAM:PF03478
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr3D:+:563833711..563835847

Molecular Weight (calculated)

43617.7 Da

IEP (calculated)

6.435

GRAVY (calculated)

0.069

Length

397 amino acids

Sequence
(BLAST)

001: MAAPVLPPAK RKKEGPPRLE TSPLLPVAAA GWSALPPDLV RHVADSLLAT NDLDFYMDFR AVCSGWRAAT DDPRSDATDP RFRPRRWIVL DEVFQSQGKM
101: LLLNTDSGRF LHRELPLLND HHVVATTRNG YLVLADKSPP HAVNVLNPLT RVVIRFVAPV PPKVGSAAVV FFDDSSPTLT LFCDSSHNVY TADLSDIGFD
201: VLEGPGPEAE YDFFRKTVLA GVYADIEPAF HGVLDDLCSL LMSGDVAKFF PGGLPDATDL KWFPVGLGKH MLLVVNAEGS IFVLKKNIQI GKLVALDSIS
301: NYAIFMGLQR CLAVDAEKFP GIEANCVYYI ENLGSSAHIC KCNIKNRKVE RISEAADFVK HGKQFVLVAD RPLTIIHLLS SYTINIPDSQ MALQQIP

Best Arabidopsis Sequence Match ( AT2G17030.1 )
(BLAST)

001: MVDWSTLPKD LLDLISKSLE SSFDLIQFRS VCSSWRSAAE PKSPLPTHHL PILPDNGGSL FPDSAVGFRL SQRSILLIKP HEPCIESDSF GWLIKVEEDL
101: NVPRKVTLLD PLCDTRNSIP ENFPRVLDMS KFKVRELGRE FKLHYFNTVG DIVESLYLEK AVVKYLDCDG DYKFVLLTIH VSGKLAVFRS WDRAWTVIND
201: MPSPYDDVML FDGRFFAVDN NGRTVVVDYS SLKLTLVASP VFGGDKKFLI ESCGEMLLVD MYLSLEAVEG DPGFVEEIFE HPAFYMNERT VKFKVYRFVE
301: REESWVDVYD LEDKMLFLGD DSTFSASASD ILPLCDGSSV FFNGNVFNGE DLGAMQDRDL GVFDFRSGKI ELVQKLPEYA KLFWPPPPWI TSHARAEDHI
401: GETSSQS

Arabidopsis Description

SKIP23F-box protein SKIP23 [Source:UniProtKB/Swiss-Prot;Acc:Q3EBZ2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.