Factsheet for TraesCS6A01G141000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G095900.1	Wheat	cytosol, plasma membrane, plastid	40.61	41.74
Zm00001d021115_P001	Maize	cytosol	36.97	40.4
TraesCS3A01G497100.1	Wheat	cytosol	49.39	37.91
Zm00001d021117_P001	Maize	cytosol, plastid	37.27	36.83
Zm00001d021107_P001	Maize	cytosol	40.61	36.81
TraesCS3A01G464300.1	Wheat	cytosol	43.94	36.25
Zm00001d021099_P001	Maize	cytosol, vacuole	36.67	36.23
TraesCS3A01G464200.1	Wheat	cytosol	42.12	35.1
Zm00001d021097_P001	Maize	cytosol	39.39	34.67
TraesCS3A01G467500.1	Wheat	cytosol	36.97	34.27
TraesCS3A01G463900.1	Wheat	plastid	43.03	34.13
Zm00001d021103_P001	Maize	cytosol	30.3	32.79
TraesCS5A01G442900.1	Wheat	cytosol	42.42	30.7
TraesCS3A01G464700.1	Wheat	cytosol	36.36	29.63
TraesCS3A01G464100.1	Wheat	plastid	34.24	27.49
EES02090	Sorghum	cytosol	33.94	27.05
TraesCS3A01G463800.1	Wheat	extracellular, vacuole	16.36	22.04
TraesCS5A01G350400.1	Wheat	cytosol	21.21	19.39
TraesCS3A01G498000.1	Wheat	cytosol	21.21	17.81
TraesCS3A01G497400.1	Wheat	peroxisome	20.61	17.3
TraesCS3A01G497300.1	Wheat	cytosol	19.7	16.21

Protein Annotations

EnsemblPlants:TraesCS6A01G141000.1	EnsemblPlantsGene:TraesCS6A01G141000	InterPro:DUF295	PANTHER:PTHR33165	PANTHER:PTHR33165:SF11	PFAM:PF03478
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr6A:-:115503932..115505043

Molecular Weight (calculated)

37437.5 Da

IEP (calculated)

7.162

GRAVY (calculated)

0.167

Length

330 amino acids

Sequence
(BLAST)

001: MAAAACWSSL PSDLINRITD CLLATNDIDC YVDFRAVCSN WRSATVNPMN TSGLCFRPRL WIMLDEVFEN YARILVNTAT GRVIRKDLPL LRNYYVIATT
101: AGGFFVLADR KYHHAARLLN PFTGHLIRFK APVPFELDVA AAVSGPSPTL ILISDRSRRQ YRADPSSECF AVYEDQYTYP VTRLAVLGGM YADGVQGSLP
201: PIPDVVAKKI FHLMGMFGVE PSEMYSDDLI DNFAGYIPQM IHANRCFLVK FDGEVFVIFK LRHHMEVFKM DTERDLLEPV KSIGNLVIFI GYRRCLIVNA
301: EKFTSIDANC IYYIRSIDYS IHIYSLLFGL

Best Arabidopsis Sequence Match ( AT2G17036.2 )
(BLAST)

001: MDWATLPKDL LDLISKCLES SFDLIQFRSV CSSWRSAAGP KRLLWAHNLP FFPSDDKPFL SNVILRVAHQ SILLIKPNEP QCEADLFGWI VKVWDNIYVS
101: RKMTLLKPLS SSRNYFPQHL PRIFDMSKFT VRELCREVKL YHPDYYCVPG HTALELELGK TVVKYLNDDK FVLLTILEYG KLAVFRSWDR EWTVINDYIP
201: SRCQDLIMFD GRFFAIDYNG RTVVVDYSSF KLTLAANPLI GGGDKKFLIE SCGEMFLVDI EFCLNEKPEF TGGFYSYFNE TTVSYKFKFF KLVEREKRWV
301: EVEDLGDKMF FLGDDSTFSA STADIIPRCV GTGSFVFFYT HEESLVVMDD RNLGVFDFRS GKTELVNKLP EYAKLFWPPP PWITTSHESV ENYTGETSSQ
401: SQS

Arabidopsis Description

F-box protein At2g17036 [Source:UniProtKB/Swiss-Prot;Acc:Q6DR20]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.