Factsheet for TraesCS2B01G363100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid, peroxisome

Predictor Summary:

mitochondrion 2
cytosol 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G343100.1	Wheat	cytosol	72.24	62.96
TraesCS3B01G507700.1	Wheat	endoplasmic reticulum, golgi	50.99	41.96
TraesCS1B01G077100.1	Wheat	cytosol	49.01	40.42
TraesCS3B01G508400.1	Wheat	cytosol	38.53	37.99
TraesCS3A01G464100.1	Wheat	plastid	43.34	37.23
TraesCS3B01G507400.1	Wheat	cytosol	38.81	33.99
TraesCS3B01G507800.1	Wheat	cytosol, plasma membrane, plastid	36.83	33.08
Zm00001d021115_P001	Maize	cytosol	27.2	31.79
TraesCS6B01G438000.1	Wheat	cytosol, plastid	35.98	31.13
Zm00001d021117_P001	Maize	cytosol, plastid	27.48	29.04
Zm00001d021099_P001	Maize	cytosol, vacuole	27.2	28.74
Zm00001d021107_P001	Maize	cytosol	29.46	28.57
TraesCS1B01G127800.1	Wheat	plasma membrane	30.59	28.27
Zm00001d021097_P001	Maize	cytosol	29.46	27.73
TraesCS4B01G058700.1	Wheat	plastid	34.56	27.54
TraesCS1B01G110300.1	Wheat	cytosol	24.65	24.51
TraesCS5B01G447400.1	Wheat	cytosol, plastid	30.59	23.95
Zm00001d021103_P001	Maize	cytosol	20.68	23.93
TraesCS3B01G507200.1	Wheat	cytosol	12.46	23.91
EES02090	Sorghum	cytosol	26.63	22.71
TraesCS3B01G572600.1	Wheat	peroxisome	18.98	20.55
TraesCS3B01G560700.1	Wheat	cytosol	21.53	19.34
TraesCS3B01G560000.1	Wheat	cytosol	21.25	18.61
TraesCS3B01G559900.1	Wheat	cytosol	21.25	18.56
TraesCS6B01G450800.1	Wheat	mitochondrion	22.38	18.08
TraesCS3B01G553300.1	Wheat	cytosol	18.13	17.2
TraesCS3B01G562600.1	Wheat	peroxisome	18.98	16.96
TraesCS3B01G560200.1	Wheat	cytosol	17.85	16.11
TraesCS6B01G350200.1	Wheat	cytosol	15.3	14.79
TraesCS3B01G536000.1	Wheat	cytosol	15.58	14.4
TraesCS3B01G597100.1	Wheat	mitochondrion, plastid	12.18	14.29
TraesCS3B01G585500.1	Wheat	cytosol, mitochondrion	11.9	13.95

Protein Annotations

EnsemblPlants:TraesCS2B01G363100.1

EnsemblPlantsGene:TraesCS2B01G363100

PANTHER:PTHR33165

PANTHER:PTHR33165:SF11

SEG:seg

MapMan:35.2

Description

No Description!

Coordinates

chr2B:-:517436704..517438016

Molecular Weight (calculated)

38805.0 Da

IEP (calculated)

7.530

GRAVY (calculated)

0.038

Length

353 amino acids

Sequence
(BLAST)

001: MLQELVRAAM AAAPGDVPPP LATPALLPQA KSVKEDPSFP QASPVVPAMT LPPDLVRRVG DSLLSTNDID CYIHFRAVCP GWRAATDDPM RDTSDPRFQP
101: RRWIVLDEDF QSEGKLLLLN TESGRFLHRK LPLLSDHYVV ATTRNGYLVL ADKSPPHSAS VLNPLTGVVI RFMAPVPPEV GYAAVSFANS ALKLTLFADS
201: SHEIYSAYPD NKSSVVHKVQ QAAYVFFRNA LVGGVYTNTI GLVVIARLCR LLMTPDANHL CFPVALGREM LLVGSAEVSF FIFKTDKEFS DGGSICKCDI
301: KDRKVEKISE TADFIKKDKK FVLVADRPST IIHLLSSYTI NIPDSQLALQ QIP

Best Arabidopsis Sequence Match ( AT2G17030.1 )
(BLAST)

001: MVDWSTLPKD LLDLISKSLE SSFDLIQFRS VCSSWRSAAE PKSPLPTHHL PILPDNGGSL FPDSAVGFRL SQRSILLIKP HEPCIESDSF GWLIKVEEDL
101: NVPRKVTLLD PLCDTRNSIP ENFPRVLDMS KFKVRELGRE FKLHYFNTVG DIVESLYLEK AVVKYLDCDG DYKFVLLTIH VSGKLAVFRS WDRAWTVIND
201: MPSPYDDVML FDGRFFAVDN NGRTVVVDYS SLKLTLVASP VFGGDKKFLI ESCGEMLLVD MYLSLEAVEG DPGFVEEIFE HPAFYMNERT VKFKVYRFVE
301: REESWVDVYD LEDKMLFLGD DSTFSASASD ILPLCDGSSV FFNGNVFNGE DLGAMQDRDL GVFDFRSGKI ELVQKLPEYA KLFWPPPPWI TSHARAEDHI
401: GETSSQS

Arabidopsis Description

SKIP23F-box protein SKIP23 [Source:UniProtKB/Swiss-Prot;Acc:Q3EBZ2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.