Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G498000.1 | Wheat | cytosol | 69.87 | 70.23 |
| TraesCS3B01G560700.1 | Wheat | cytosol | 68.86 | 69.21 |
| TraesCSU01G057700.1 | Wheat | cytosol | 26.84 | 28.8 |
| KXG34167 | Sorghum | cytosol | 15.44 | 19.24 |
| OQU88199 | Sorghum | cytosol, extracellular, plastid | 11.9 | 16.04 |
| Os03t0783800-00 | Rice | nucleus | 15.19 | 15.54 |
Protein Annotations
| EnsemblPlants:TraesCSU01G057900.1 | EnsemblPlantsGene:TraesCSU01G057900 | InterPro:DUF295 | PANTHER:PTHR33165 | PANTHER:PTHR33165:SF11 | PFAM:PF03478 |
| SEG:seg | SUPFAM:SSF75011 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chrUn:+:45707782..45711023
Molecular Weight (calculated)
43716.2 Da
IEP (calculated)
7.711
GRAVY (calculated)
-0.100
Length
395 amino acids
Sequence
(BLAST)
(BLAST)
001: MADWSALPSD LVRSVADRLL AAANDVDYYM GVRAVCHGWR LAMADPCRCV TDVDLLRFRP RHWIMLHDDE DETVDDGGVV RLFLNVATGR FLRRRVPLLR
101: DHVLVAASDG LLVLGDKKYP HRASVINPFR GSLVRFASAI PRVNRVRAAV TGSEDDPSLS LVFSFFHDPY SDAVSCAHST GDELSPVRQS AGAGPFLCWK
201: EASMATYRGH VYVADRDGQI VRYVVPSAQH RQQDCHTELI GKAPLENVTG GRCGRAFLVA SAGELLLVRQ RHLRRRRAVE VFRVDVERKA PLEPVRSIGR
301: RALFLGGRCV SVNAGELASV DGDCVYLASE SGNVAWRYDL RDGGETMISS FDARPFGLVQ ALLNYCFVLP DAKAQLHSVY RTECLLSVQS SSESD
101: DHVLVAASDG LLVLGDKKYP HRASVINPFR GSLVRFASAI PRVNRVRAAV TGSEDDPSLS LVFSFFHDPY SDAVSCAHST GDELSPVRQS AGAGPFLCWK
201: EASMATYRGH VYVADRDGQI VRYVVPSAQH RQQDCHTELI GKAPLENVTG GRCGRAFLVA SAGELLLVRQ RHLRRRRAVE VFRVDVERKA PLEPVRSIGR
301: RALFLGGRCV SVNAGELASV DGDCVYLASE SGNVAWRYDL RDGGETMISS FDARPFGLVQ ALLNYCFVLP DAKAQLHSVY RTECLLSVQS SSESD
001: MDSSSLLPSQ WSDLPLDILE LISDRLDHDS SDTIHLLCLR SVCATWRLSL PLSNKNNRLS KFPKYLPFWS SSSSSSGFFT LKQSNVYKLE APLNPRTCLV
101: KLQETTPGIM RVLDLFSNDR ICFLPENFPS KIDLQEFHVR LVRRTYRMEY ANNGGGAVPC FWSLHSDKVV ILSSGEDSAI IAIHSGGKLG FLKSGNDEKW
201: KILDNSWNVI YEDIMLYKDN RCIVVDDKGK TVIYDVDFKV SDLAEGLVGG GGHKKHLVEC SGGEVFLVDK YVKTVWCKSD ISKSVVEFRV YNLKREEKRW
301: EEVRDLGDVA LFIGDDCSFS VQNPAGDLAG GFIFYSDYRN GGRSRGICSD GDGVFNVDMQ GDFVFSIKPN YFGP
101: KLQETTPGIM RVLDLFSNDR ICFLPENFPS KIDLQEFHVR LVRRTYRMEY ANNGGGAVPC FWSLHSDKVV ILSSGEDSAI IAIHSGGKLG FLKSGNDEKW
201: KILDNSWNVI YEDIMLYKDN RCIVVDDKGK TVIYDVDFKV SDLAEGLVGG GGHKKHLVEC SGGEVFLVDK YVKTVWCKSD ISKSVVEFRV YNLKREEKRW
301: EEVRDLGDVA LFIGDDCSFS VQNPAGDLAG GFIFYSDYRN GGRSRGICSD GDGVFNVDMQ GDFVFSIKPN YFGP
Arabidopsis Description
Putative F-box protein At5g60060 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVG8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.