Factsheet for TraesCSU01G108100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

endoplasmic reticulum 4
plasma membrane 4
vacuole 6
golgi 4
extracellular 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

plastid: 24136528

msms PMID: 24136528 doi

A Nozawa, Y Tozawa

Cell-Free Science and Technology Research Center, Ehime University, Matsuyama, Ehime, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G108600.1	Wheat	vacuole	84.88	95.74
TraesCSU01G108400.1	Wheat	vacuole	93.47	92.83
TraesCSU01G108500.1	Wheat	vacuole	91.07	92.66
TraesCSU01G220600.1	Wheat	extracellular	91.75	92.07
TraesCSU01G220200.1	Wheat	nucleus	92.44	90.57
TraesCSU01G108300.1	Wheat	vacuole	92.78	90.0
TraesCSU01G188800.1	Wheat	plastid, vacuole	93.81	88.93
TraesCSU01G239000.1	Wheat	vacuole	93.81	88.64
TraesCSU01G108700.1	Wheat	plastid	84.88	87.59
TraesCSU01G108200.1	Wheat	vacuole	93.81	86.39
TraesCSU01G153800.1	Wheat	vacuole	83.85	82.99
TraesCS6B01G086500.1	Wheat	vacuole	87.97	81.53
TraesCSU01G160200.1	Wheat	vacuole	64.26	80.95

Protein Annotations

EnsemblPlants:TraesCSU01G108100.1	EnsemblPlantsGene:TraesCSU01G108100	Gene3D:1.10.110.10	GO:GO:0003674	GO:GO:0045735	InterPro:Bifun_inhib/LTP/seed_sf
InterPro:Bifunc_inhib/LTP/seed_store	InterPro:Glia_glutenin	ncoils:Coil	PFAM:PF00234	PRINTS:PR00208	PRINTS:PR00209
SEG:seg	SignalP:SignalP-noTM	SMART:SM00499	SUPFAM:SSF47699	MapMan:35.1	:

Description

No Description!

Coordinates

chrUn:+:94280480..94281538

Molecular Weight (calculated)

33589.9 Da

IEP (calculated)

7.558

GRAVY (calculated)

-0.812

Length

291 amino acids

Sequence
(BLAST)

001: MKTFLILALL AIVATTATTA VRVPVPQLQL QNPSQQQPQE QVPLVQEQQF PGQQQPFPPQ QPYPQPQPFP SQQPYLQLQP FPQPQLPYPQ PQPFRPQQPY
101: PQPQPQYSQP QQPISQQQQQ QQQQQQQQQQ ILQQILQQQL IPCRDVVLQQ HNIAHGSSQV LQESTYQLVQ QLCCQQLWQI PEQSRCQAIH NVVHAIILHQ
201: QHHHHQQQQQ QQQQQPLSQV SFQQPQQQYP SGQGFFQPSQ QNPQAQGSFQ PQQLPQFEAI RNLALQTLPA MCNVYIPPYC TIAPFGIFGT N

Best Arabidopsis Sequence Match ( AT1G62970.1 )
(BLAST)

001: MMSHGGGGGV SNGGGGDAER MLAQAEKLLL SGDLNGSKTY AIRACEADHS LVDHAELILA VADTLVAGES RIRGTTSDLP DWYAVLRLVR LTHNPELVAT
101: QYSRLAVLLN PSRNRYPYSE QAFRLISDAW YVLSDPSRKT LYDRELHLSQ FGQLGQLGFQ LFNQTPQSQS QSPQHHQQQS QSPQHPNQNQ TVSFQNQQLP
201: FQLHQPHFAQ AVQTQSQSQQ QRSQFDQQLL QEQQQASWRQ QVGQEHSSGS SGDWKRPVEE VRLINLNNAT ERVQSSRRFA EPERPPSRSF EGSSHRTPST
301: ELTWASKPTP VSEPVRHSEL VPWQYSEPAR QYQLSSRSSE AAQLSLLPSV SDSSHASQPT RSNQSHAVSK PQPVSKPHPP FPMSQPPPTS NPFPLSQPPS
401: NSKPFPMSQS SQNSKPFPVS QSSQKSKPLL VSQSSQRSKP LPVSQSLQNS NPFPVSQPSS NSKPFPVSQP QPASNPFPVS QPRPNSQPFS MSQPSSTARP
501: FPASQPPAAS KSFPISQPPT TSKPFVSQPP NTSKPMPVSQ PPTTSKPLPV SQPPPTFQST CPSQPPAASS SLSPLPPVFN STQSFQSPPV STTPSAVPEA
601: STIPSPPAPA PVAQPTHVFN QTPPPEQTPK SGAARTDSEP EVSSFWTTCP YCYVLYEYPI IYEESVLKCQ TKSCRRAYQA VKVPSPPPVA EEDSYYCCWG
701: FYPIGFSEVV TKIPVTGLHT KIPVSDLPKS APKKPSPKVY YYDDEEEDDD SYIGSDPSED DDDDDWLMNG TKRRKNVKQS KAKATTKPKR QKVIEVD

Arabidopsis Description

Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WQM3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.