Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- plastid 1
- endoplasmic reticulum 4
- plasma membrane 4
- vacuole 6
- golgi 4
- extracellular 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G108600.1 | Wheat | vacuole | 72.93 | 88.76 |
| TraesCSU01G108100.1 | Wheat | plastid | 81.53 | 87.97 |
| TraesCSU01G108400.1 | Wheat | vacuole | 81.85 | 87.71 |
| TraesCSU01G108300.1 | Wheat | vacuole | 83.44 | 87.33 |
| TraesCSU01G220600.1 | Wheat | extracellular | 80.25 | 86.9 |
| TraesCSU01G108500.1 | Wheat | vacuole | 78.98 | 86.71 |
| TraesCSU01G220200.1 | Wheat | nucleus | 81.85 | 86.53 |
| TraesCS6B01G065600.1 | Wheat | endoplasmic reticulum, extracellular | 65.61 | 84.77 |
| TraesCS6B01G066100.1 | Wheat | extracellular | 60.83 | 84.51 |
| TraesCS6B01G065800.1 | Wheat | vacuole | 84.39 | 83.86 |
| TraesCSU01G108200.1 | Wheat | vacuole | 84.08 | 83.54 |
| TraesCSU01G188800.1 | Wheat | plastid, vacuole | 81.53 | 83.39 |
| TraesCS6B01G066000.1 | Wheat | vacuole | 74.2 | 83.21 |
| TraesCSU01G239000.1 | Wheat | vacuole | 81.53 | 83.12 |
| TraesCS6B01G065900.1 | Wheat | plastid | 24.52 | 59.69 |
| TraesCS1B01G010700.1 | Wheat | cytosol | 20.7 | 52.85 |
| TraesCS1B01G011000.1 | Wheat | endoplasmic reticulum | 41.08 | 44.33 |
| TraesCS1B01G010900.1 | Wheat | extracellular | 40.13 | 43.3 |
| TraesCS1B01G011300.1 | Wheat | golgi | 27.39 | 42.36 |
| TraesCS1B01G010500.1 | Wheat | extracellular | 38.53 | 40.74 |
| TraesCS1B01G010800.1 | Wheat | vacuole | 43.63 | 40.06 |
| TraesCS1B01G010400.1 | Wheat | golgi | 38.22 | 39.74 |
| TraesCS1B01G010600.1 | Wheat | vacuole | 32.8 | 32.49 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G086500.1 | EnsemblPlantsGene:TraesCS6B01G086500 | Gene3D:1.10.110.10 | GO:GO:0003674 | GO:GO:0045735 | InterPro:Bifun_inhib/LTP/seed_sf |
| InterPro:Bifunc_inhib/LTP/seed_store | InterPro:Glia_glutenin | ncoils:Coil | PFAM:PF13016 | PRINTS:PR00208 | PRINTS:PR00209 |
| SEG:seg | SignalP:SignalP-noTM | SMART:SM00499 | SUPFAM:SSF47699 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr6B:+:62653760..62655184
Molecular Weight (calculated)
36388.9 Da
IEP (calculated)
8.128
GRAVY (calculated)
-1.001
Length
314 amino acids
Sequence
(BLAST)
(BLAST)
001: MKTFIILALL AIVATTATTA VTVPVPQLQP QNPSQQQPQK QVPLVQQQQF LGQQQPFPPQ QPYPQPQPFP SQQPYPQPQP FLPQLPYPRP QPFLPQQPYP
101: QPEPQYPQPQ QPISQQQQQQ QQQQQQILQQ ILQQQLIPCR DVILQQHNIA HASSQVLQQS TYQLLQQLCC QQLWQIPEQS RCQAIQNVVH AIILHQQQQR
201: QQQQQQQQQQ QQQQQQQQQQ QQQQQQQQQQ QQPSSQVSFQ QPQQQYPSGQ GSFQPSQQNP QAQSSVQHQQ LPQFEEIRNL ALQTLPAVCN VYIPPYCSTT
301: IAPFGIFATS NRHE
101: QPEPQYPQPQ QPISQQQQQQ QQQQQQILQQ ILQQQLIPCR DVILQQHNIA HASSQVLQQS TYQLLQQLCC QQLWQIPEQS RCQAIQNVVH AIILHQQQQR
201: QQQQQQQQQQ QQQQQQQQQQ QQQQQQQQQQ QQPSSQVSFQ QPQQQYPSGQ GSFQPSQQNP QAQSSVQHQQ LPQFEEIRNL ALQTLPAVCN VYIPPYCSTT
301: IAPFGIFATS NRHE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.