Factsheet for TraesCS6B01G065900.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 1
cytosol 1
endoplasmic reticulum 1
plasma membrane 1
vacuole 1
golgi 1
extracellular 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G010700.1	Wheat	cytosol	27.91	29.27
TraesCS6B01G065600.1	Wheat	endoplasmic reticulum, extracellular	55.04	29.22
TraesCS6A01G049100.1	Wheat	vacuole	60.47	27.56
TraesCS6B01G065800.1	Wheat	vacuole	67.44	27.53
TraesCS6A01G049800.1	Wheat	extracellular	58.91	27.24
TraesCS6A01G049400.1	Wheat	plastid	58.91	26.76
TraesCS6A01G049600.1	Wheat	vacuole	58.14	26.13
TraesCS6A01G049700.1	Wheat	vacuole	59.69	25.93
TraesCS6B01G066000.1	Wheat	vacuole	55.81	25.71
TraesCS6A01G049200.1	Wheat	vacuole	59.69	25.16
TraesCS6B01G086500.1	Wheat	vacuole	59.69	24.52
TraesCS1B01G011300.1	Wheat	golgi	30.23	19.21
TraesCS1B01G011000.1	Wheat	endoplasmic reticulum	33.33	14.78
TraesCS1B01G010900.1	Wheat	extracellular	32.56	14.43
TraesCS1B01G010600.1	Wheat	vacuole	33.33	13.56
TraesCS1B01G010500.1	Wheat	extracellular	28.68	12.46
TraesCS1B01G010800.1	Wheat	vacuole	32.56	12.28
TraesCS1B01G010400.1	Wheat	golgi	27.91	11.92
TraesCS6B01G066100.1	Wheat	extracellular	20.16	11.5
TraesCS6A01G049500.1	Wheat	vacuole	19.38	10.82

Protein Annotations

EnsemblPlants:TraesCS6B01G065900.1	EnsemblPlantsGene:TraesCS6B01G065900	InterPro:Bifun_inhib/LTP/seed_sf	InterPro:Bifunc_inhib/LTP/seed_store	PFAM:PF00234	PRINTS:PR00209
SEG:seg	SUPFAM:SSF47699	TIGR:cd00261	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr6B:+:43572160..43572611

Molecular Weight (calculated)

14308.3 Da

IEP (calculated)

8.777

GRAVY (calculated)

-0.188

Length

129 amino acids

Sequence
(BLAST)

001: MQAHKFCNKV LTSYCNNCVV NNCCRSLSSR GAKPSIMLLM LLLCINNNNN KPSSQVSFQQ PQQQYPSSQV FFQPSQLNPQ AQGSVQPQQL PQFAEIRNLA
101: LQTLPAMCNV YIPPHCSTTI APFGIFGTN

Best Arabidopsis Sequence Match ( AT4G36280.1 )
(BLAST)

001: MPPMAKNAAV TDVVHLDSDS DSDNGVVGGR ESASTIAGAA TMAPRETLEC RSFWKAGDYF VIPNVVTPTA PGMLEHARVH PRFLHSNATS HKWAFGAIAE
101: LLDNAVDEIQ NGATFVKIDK INIVKDNSPA LVFQDDGGGM DPAGLRKCMS LGYSSKKSNT TIGQYGNGFK TSTMRLGADA IVFSRSTRGG TSTQSVGILS
201: YTFLRKTGQD DVTVPMIDID ISKERPQPII YGSPEDWAAN LEILLKWSPF STEDELLQQF EDVGTHGTKV IIYNLWLNDE GIYELSFDDD EEDIRLRDES
301: VNDGKRLHHK ILELRSHISY HLRYSLRAYA SMLYLKKFKN FKIIIRGIPV EQFNIADGFR FPEIIKYKPH TATTEQASTE IKIGFVKEAP KLAICGFNVY
401: HKNRLIRPFW KVTMGGDSTG HGVVGVLEAN FIEPAHDKQD FERSSLFQRL EARLKKIVYS YWYSHCHLLG YHKYQMPADK SKKIAIPDQP PTISTVNPSP
501: LPSDKISQGG PIIREINLSN ATSSRTVAFA SPHLRNSTGL RSNFQPVQLN PQPTAADTGN NLDGKSAGEI RQENLQLFMR CEEYIKKENE TEQTVKSLEK
601: ELEEFKSKCA HLALLVDAKK KEMQQA

Arabidopsis Description

MORC2Protein MICRORCHIDIA 2 [Source:UniProtKB/Swiss-Prot;Acc:Q5FV35]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.