Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 1
- endoplasmic reticulum 4
- plasma membrane 4
- vacuole 5
- golgi 4
- extracellular 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G066000.1 | Wheat | vacuole | 90.71 | 73.21 |
| TraesCSU01G108700.1 | Wheat | plastid | 84.51 | 67.73 |
| TraesCS6B01G065600.1 | Wheat | endoplasmic reticulum, extracellular | 65.49 | 60.91 |
| TraesCS6B01G086500.1 | Wheat | vacuole | 84.51 | 60.83 |
| TraesCS6B01G065800.1 | Wheat | vacuole | 84.07 | 60.13 |
| TraesCS1B01G010900.1 | Wheat | extracellular | 46.9 | 36.43 |
| TraesCS1B01G011000.1 | Wheat | endoplasmic reticulum | 46.9 | 36.43 |
| TraesCS1B01G010500.1 | Wheat | extracellular | 46.9 | 35.69 |
| TraesCS1B01G010400.1 | Wheat | golgi | 46.46 | 34.77 |
| TraesCS1B01G010800.1 | Wheat | vacuole | 50.0 | 33.04 |
| TraesCS1B01G011300.1 | Wheat | golgi | 29.2 | 32.51 |
| TraesCS1B01G010700.1 | Wheat | cytosol | 15.49 | 28.46 |
| TraesCS1B01G010600.1 | Wheat | vacuole | 36.73 | 26.18 |
| TraesCS6B01G065900.1 | Wheat | plastid | 11.5 | 20.16 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G066100.1 | EnsemblPlantsGene:TraesCS6B01G066100 | Gene3D:1.10.110.10 | GO:GO:0003674 | GO:GO:0045735 | InterPro:Bifun_inhib/LTP/seed_sf |
| InterPro:Bifunc_inhib/LTP/seed_store | InterPro:Glia_glutenin | ncoils:Coil | PFAM:PF13016 | PRINTS:PR00208 | PRINTS:PR00209 |
| SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF47699 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr6B:+:44061777..44062807
Molecular Weight (calculated)
26195.0 Da
IEP (calculated)
8.335
GRAVY (calculated)
-1.042
Length
226 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSFLILALL AIVATTATTA VRVPVPQLQP QNPSQQQPQE QVPLVQQQQF LGQQQQKFPG QQQPFPPQQP YPQPQPFLPQ LPFPQPQPFP PQQSYPQPQP
101: QYPQPQQPIS QQQAQQQQQQ QQQILQQILQ QQLIPCKDVV LQQPNIAHAS SQVSQQSYQL LQQLCCQQLW QTPEQSRCQA IHNVVHAIIL HHQQQQQQQQ
201: QQQQQQQQQQ QQQQPSSQVS YQQPQQ
101: QYPQPQQPIS QQQAQQQQQQ QQQILQQILQ QQLIPCKDVV LQQPNIAHAS SQVSQQSYQL LQQLCCQQLW QTPEQSRCQA IHNVVHAIIL HHQQQQQQQQ
201: QQQQQQQQQQ QQQQPSSQVS YQQPQQ
001: MQFDESDARV WIWFEIRRED DIVELLWQSG QVVGTNQTHR QSYDPPPILR GSGSGRGEEN APLSQPPPHL HQQNLFIQEG EMYSWLHHSY RQNYFCSELL
101: NSTPATHPQS SISLAPRQTI ATRRAENFMN FSWLRGNIFT GGRVDEAGPS FSVVRESMQV GSNTTPPSSS ATESCVIPAT EGTASRVSGT LAAHDLGRKG
201: KAVAVEAAGT PSSGVCKAET EPVQIQPATE SKLKAREETH GTEEARGSTS RKRSRTAEMH NLAERRRREK INEKMKTLQQ LIPRCNKSTK VSTLDDAIEY
301: VKSLQSQIQM MSTGQGMMSP MMNAGNTQQF MPHMAMDMNR PPPFIPFPGT SFPMPAQMAG VGPSYPAPRY PFPNIQTFDP SRVRLPSPQP NPVSNQPQFP
401: AYMNPYSQFA GPHQLQQPPP PPFQGQTTSQ LSSGQASSSK EPEDQENQPT A
101: NSTPATHPQS SISLAPRQTI ATRRAENFMN FSWLRGNIFT GGRVDEAGPS FSVVRESMQV GSNTTPPSSS ATESCVIPAT EGTASRVSGT LAAHDLGRKG
201: KAVAVEAAGT PSSGVCKAET EPVQIQPATE SKLKAREETH GTEEARGSTS RKRSRTAEMH NLAERRRREK INEKMKTLQQ LIPRCNKSTK VSTLDDAIEY
301: VKSLQSQIQM MSTGQGMMSP MMNAGNTQQF MPHMAMDMNR PPPFIPFPGT SFPMPAQMAG VGPSYPAPRY PFPNIQTFDP SRVRLPSPQP NPVSNQPQFP
401: AYMNPYSQFA GPHQLQQPPP PPFQGQTTSQ LSSGQASSSK EPEDQENQPT A
Arabidopsis Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein [Source:TAIR;Acc:AT4G28800]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.