Factsheet for TraesCS6B01G065800.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

plastid 1
endoplasmic reticulum 4
plasma membrane 4
vacuole 6
golgi 4
extracellular 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

endoplasmic reticulum: 23001535
vacuole: 23001535

gfp PMID: 23001535 doi

M Francin-Allami, A Bouder, Y Popineau

INRA, UR1268, Biopolymères Interactions Assemblages, 44300, Nantes, France. mathilde.allami@nantes.inra.fr

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G065600.1	Wheat	endoplasmic reticulum, extracellular	66.14	86.01
TraesCS6B01G066000.1	Wheat	vacuole	75.0	84.64
TraesCS6B01G086500.1	Wheat	vacuole	83.86	84.39
TraesCS6B01G066100.1	Wheat	extracellular	60.13	84.07
TraesCS6B01G065900.1	Wheat	plastid	27.53	67.44
TraesCS1B01G010700.1	Wheat	cytosol	20.89	53.66
TraesCS1B01G011000.1	Wheat	endoplasmic reticulum	40.19	43.64
TraesCS1B01G011300.1	Wheat	golgi	27.85	43.35
TraesCS1B01G010900.1	Wheat	extracellular	39.87	43.3
TraesCS1B01G010500.1	Wheat	extracellular	39.24	41.75
TraesCS1B01G010400.1	Wheat	golgi	38.61	40.4
TraesCS1B01G010800.1	Wheat	vacuole	42.72	39.47
TraesCS1B01G010600.1	Wheat	vacuole	33.23	33.12

Protein Annotations

EnsemblPlants:TraesCS6B01G065800.1	EnsemblPlantsGene:TraesCS6B01G065800	GO:GO:0003674	GO:GO:0045735	InterPro:Bifun_inhib/LTP/seed_sf	InterPro:Bifunc_inhib/LTP/seed_store
InterPro:Glia_glutenin	ncoils:Coil	PFAM:PF00234	PRINTS:PR00208	PRINTS:PR00209	SEG:seg
SignalP:SignalP-noTM	SMART:SM00499	SUPFAM:SSF47699	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr6B:+:43549183..43550283

Molecular Weight (calculated)

36531.3 Da

IEP (calculated)

8.369

GRAVY (calculated)

-0.944

Length

316 amino acids

Sequence
(BLAST)

001: MKTFLILALV ATTATTAVRV PVPQLQPKNP SQQQPQEQVP LVQQQQFPGQ QQQFPPQQPY PQPQPFPSQQ PYLQLQPFPQ PQPFLPQLPY PQPQSFPPQQ
101: PYPQQRPKYL QPQQPISQQQ AQQQQQQQQQ QQQQQQQQQQ QILQQILQQQ LIPCRDVVLQ QHNIAHASSQ VLQQSTYQLL QQLCCQQLLQ IPEQSRCQAI
201: HNVVHAIIMH QQEQQQQLQQ QQQQQLQQQQ QQQQQQQQPS SQVSFQQPQQ QYPSSQVSFQ PSQLNPQAQG SVQPQQLPQF AEIRNLALQT LPAMCNVYIP
301: PHCSTTIAPF GIFGTN

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.