Factsheet for TraesCS1B01G010600.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

endoplasmic reticulum 5
plasma membrane 4
vacuole 6
golgi 4
extracellular 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G001300.1	Wheat	vacuole	84.23	82.41
TraesCS1A01G007200.1	Wheat	nucleus, plastid	52.37	80.58
HORVU1Hr1G000640.1	Barley	vacuole	60.25	59.87
TraesCS1B01G011000.1	Wheat	endoplasmic reticulum	40.69	44.33
TraesCS1B01G010500.1	Wheat	extracellular	41.32	44.11
TraesCS1B01G010700.1	Wheat	cytosol	16.72	43.09
TraesCS1B01G010900.1	Wheat	extracellular	39.43	42.96
TraesCS1B01G010400.1	Wheat	golgi	40.38	42.38
TraesCS1B01G011300.1	Wheat	golgi	26.18	40.89
TraesCS1B01G010800.1	Wheat	vacuole	42.27	39.18
TraesCS6B01G066000.1	Wheat	vacuole	33.75	38.21
TraesCS6B01G066100.1	Wheat	extracellular	26.18	36.73
TraesCS6B01G065900.1	Wheat	plastid	13.56	33.33
TraesCS6B01G065800.1	Wheat	vacuole	33.12	33.23
TraesCS6B01G065600.1	Wheat	endoplasmic reticulum, extracellular	25.24	32.92
TraesCS6B01G086500.1	Wheat	vacuole	32.49	32.8

Protein Annotations

EnsemblPlants:TraesCS1B01G010600.1	EnsemblPlantsGene:TraesCS1B01G010600	Gene3D:1.10.110.10	GO:GO:0003674	GO:GO:0045735	InterPro:Bifun_inhib/LTP/seed_sf
InterPro:Bifunc_inhib/LTP/seed_store	InterPro:Glia_glutenin	PFAM:PF13016	PRINTS:PR00208	PRINTS:PR00209	SEG:seg
SignalP:SignalP-noTM	SMART:SM00499	SUPFAM:SSF47699	TIGR:cd00261	MapMan:35.1	:

Description

No Description!

Coordinates

chr1B:-:5003725..5004923

Molecular Weight (calculated)

36577.2 Da

IEP (calculated)

7.737

GRAVY (calculated)

-0.694

Length

317 amino acids

Sequence
(BLAST)

001: MKILLVFALL VVSTTITTAI VQLDPSVHVQ ERPQQSFLQQ QPLTQQQPLP LQEPQQPLFP QKEPQQPFSL QQPQPQEQQP YPQQPLLQQQ LPQQHLFPQQ
101: PPQQQFPQQM PLPYEQQTFP QQQQQQPQFP QQQPFPQYQQ PLTQQPYPQE QPLPQQQPSV EEKQQLNLCK EFLLQQCNPE EKLSLIQSVI PFLRPKTSQQ
201: NSCQLKRLQC CRQLARINEP SRCPAIHNIV HAIVMQQQHV DRGFGQPQPQ QLGQGMPMQP QYQLGQGFIL PQQLAQFKLV RLLVIQTLPM LCNVHVPSDC
301: YTTSAPFGSM TAMNGGQ

Best Arabidopsis Sequence Match ( AT1G34360.1 )
(BLAST)

001: MAIWRIINRS YLKYASNQLT RNYYTQVCLA SSTHVVKQTT KLSSFDIPNS DICTRPSNIF QNLRFLATSA QTRKKEAEVD SDGPRLNEKI TGDYVRLVSE
101: EGHCVVSLRE ALRRAKELQC DLVEVQRDAK PPVCKIVKYS LELYKKAKVG KERAKAKRAE AIRPDIKEIR FTPKIEAKDL KFKSDQALKL MESGYRVKCL
201: AVPDKDKHKE LEPEKLLELL FRFTCFIGDA LVESWPEADR KGAVVIVRHA KFGPPKKGGV KLMKDIDIKS ARVKEESPKP DSSKAGVATV DDQEDIEKSE
301: PRFSVEQAQP VKFQNAYAKR EPSSEFSGGR DASRFEPQSP NQHVNPQRPR FSNQAPNQQP TGRFDPQSPN QPPSAPRPQF PNQQPTGRFD PQFPSQPPRP
401: QFPNQAPNQQ STGRFNPQFP NQRPSPPQSR FPDQAPNQQP SGPSPNRHPD RQGPPPRFQN QAPNQQPTGR FEPQPPNPPR APPRPQTRLP NETSNEQPTA
501: PGRSSGPASG YGIFSTPKTK

Arabidopsis Description

IF3-1Translation initiation factor IF3-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q6NLP2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.