Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 1
- vacuole 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G007200.1 | Wheat | nucleus, plastid | 43.89 | 67.96 |
| TraesCS1B01G010600.1 | Wheat | vacuole | 59.87 | 60.25 |
| TraesCS1D01G001300.1 | Wheat | vacuole | 61.13 | 60.19 |
| HORVU1Hr1G000680.1 | Barley | vacuole | 30.72 | 45.37 |
| HORVU1Hr1G000700.1 | Barley | extracellular, vacuole | 36.36 | 33.82 |
Protein Annotations
| Gene3D:1.10.110.10 | MapMan:35.1 | UniProt:A0A287EEZ5 | InterPro:Bifun_inhib/LTP/seed_sf | InterPro:Bifunc_inhib/LTP/seed_store | GO:GO:0003674 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0045735 | InterPro:Glia_glutenin | EnsemblPlantsGene:HORVU1Hr1G000640 | EnsemblPlants:HORVU1Hr1G000640.1 | PFAM:PF13016 |
| PRINTS:PR00208 | PRINTS:PR00209 | SMART:SM00499 | SUPFAM:SSF47699 | TMHMM:TMhelix | UniParc:UPI000B476B1E |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr1H:-:1611906..1613025
Molecular Weight (calculated)
36580.0 Da
IEP (calculated)
8.035
GRAVY (calculated)
-0.711
Length
319 amino acids
Sequence
(BLAST)
(BLAST)
001: HYPSFKDLQH RHPNETIKSN HKSTMKIFLL FSLLGVATAI TTTTMQFNPS GLELERPQQL FPQWQPLPQQ PPFLQQEPEQ PYPQQQPLPQ QQPFPQQPQL
101: PHQHQFPQQL PQQQFPQQMP LQPQQQPQFP QQKPFGQYQQ PLTQQPYPQQ QPLAQQQPSI EEQHQLNLCK EFLLQQCTLD EKVPLLQSVI SFLRPHISQQ
201: NSCQLKRQQC CQQLANINEQ SRCPAIQTIV HAIVMQQQQQ QVQQQVGHGF VQSQLQQLGQ GMPIQLQQQP GQALVLPQQQ AQFKVVGSLV IQTLPMLCNV
301: HVPPYCSPFG SMATGSGGQ
101: PHQHQFPQQL PQQQFPQQMP LQPQQQPQFP QQKPFGQYQQ PLTQQPYPQQ QPLAQQQPSI EEQHQLNLCK EFLLQQCTLD EKVPLLQSVI SFLRPHISQQ
201: NSCQLKRQQC CQQLANINEQ SRCPAIQTIV HAIVMQQQQQ QVQQQVGHGF VQSQLQQLGQ GMPIQLQQQP GQALVLPQQQ AQFKVVGSLV IQTLPMLCNV
301: HVPPYCSPFG SMATGSGGQ
001: MAIWRIINRS YLKYASNQLT RNYYTQVCLA SSTHVVKQTT KLSSFDIPNS DICTRPSNIF QNLRFLATSA QTRKKEAEVD SDGPRLNEKI TGDYVRLVSE
101: EGHCVVSLRE ALRRAKELQC DLVEVQRDAK PPVCKIVKYS LELYKKAKVG KERAKAKRAE AIRPDIKEIR FTPKIEAKDL KFKSDQALKL MESGYRVKCL
201: AVPDKDKHKE LEPEKLLELL FRFTCFIGDA LVESWPEADR KGAVVIVRHA KFGPPKKGGV KLMKDIDIKS ARVKEESPKP DSSKAGVATV DDQEDIEKSE
301: PRFSVEQAQP VKFQNAYAKR EPSSEFSGGR DASRFEPQSP NQHVNPQRPR FSNQAPNQQP TGRFDPQSPN QPPSAPRPQF PNQQPTGRFD PQFPSQPPRP
401: QFPNQAPNQQ STGRFNPQFP NQRPSPPQSR FPDQAPNQQP SGPSPNRHPD RQGPPPRFQN QAPNQQPTGR FEPQPPNPPR APPRPQTRLP NETSNEQPTA
501: PGRSSGPASG YGIFSTPKTK
101: EGHCVVSLRE ALRRAKELQC DLVEVQRDAK PPVCKIVKYS LELYKKAKVG KERAKAKRAE AIRPDIKEIR FTPKIEAKDL KFKSDQALKL MESGYRVKCL
201: AVPDKDKHKE LEPEKLLELL FRFTCFIGDA LVESWPEADR KGAVVIVRHA KFGPPKKGGV KLMKDIDIKS ARVKEESPKP DSSKAGVATV DDQEDIEKSE
301: PRFSVEQAQP VKFQNAYAKR EPSSEFSGGR DASRFEPQSP NQHVNPQRPR FSNQAPNQQP TGRFDPQSPN QPPSAPRPQF PNQQPTGRFD PQFPSQPPRP
401: QFPNQAPNQQ STGRFNPQFP NQRPSPPQSR FPDQAPNQQP SGPSPNRHPD RQGPPPRFQN QAPNQQPTGR FEPQPPNPPR APPRPQTRLP NETSNEQPTA
501: PGRSSGPASG YGIFSTPKTK
Arabidopsis Description
IF3-1Translation initiation factor IF3-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q6NLP2]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.