Subcellular Localization
min:
: max
Winner_takes_all: vacuole, extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 7
- endoplasmic reticulum 4
- plasma membrane 4
- golgi 4
- extracellular 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G000680.1 | Barley | vacuole | 44.02 | 69.91 |
| TraesCS1B01G011000.1 | Wheat | endoplasmic reticulum | 51.9 | 61.17 |
| TraesCS1D01G001400.1 | Wheat | nucleus | 35.86 | 60.59 |
| TraesCS1B01G010900.1 | Wheat | extracellular | 51.02 | 60.14 |
| TraesCS1D01G001000.1 | Wheat | extracellular | 51.31 | 59.06 |
| TraesCS1D01G001100.1 | Wheat | nucleus, plastid | 50.44 | 58.64 |
| TraesCS1A01G007400.1 | Wheat | extracellular | 51.02 | 58.33 |
| TraesCS1A01G007300.1 | Wheat | nucleus, plastid | 41.98 | 57.6 |
| TraesCS1B01G010500.1 | Wheat | extracellular | 49.56 | 57.24 |
| TraesCS1D01G001200.1 | Wheat | extracellular | 53.06 | 55.66 |
| TraesCS1B01G010400.1 | Wheat | golgi | 46.65 | 52.98 |
| TraesCS1B01G010800.1 | Wheat | vacuole | 50.73 | 50.88 |
| TraesCS1B01G010700.1 | Wheat | cytosol | 18.08 | 50.41 |
| HORVU1Hr1G000640.1 | Barley | vacuole | 33.82 | 36.36 |
Protein Annotations
| Gene3D:1.10.110.10 | MapMan:35.1 | InterPro:Bifun_inhib/LTP/seed_sf | InterPro:Bifunc_inhib/LTP/seed_store | GO:GO:0003674 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0045735 | InterPro:Glia_glutenin |
| EnsemblPlantsGene:HORVU1Hr1G000700 | EnsemblPlants:HORVU1Hr1G000700.1 | UniProt:M0XYT2 | PFAM:PF13016 | PRINTS:PR00208 | PRINTS:PR00209 |
| SMART:SM00499 | SUPFAM:SSF47699 | SignalP:SignalP-noTM | UniParc:UPI0002962E42 | SEG:seg | : |
Description
No Description!
Coordinates
chrchr1H:+:1891346..1892583
Molecular Weight (calculated)
39449.4 Da
IEP (calculated)
6.637
GRAVY (calculated)
-0.668
Length
343 amino acids
Sequence
(BLAST)
(BLAST)
001: MKILIILIIL AMATSFATSE MQVNPSVQVQ PTQQQTHPES QQPFIHHSQQ QFPQPQQSFP QQPQQPFPQS QQPCLQQPQH QFPQPSQPFP RQPLQPFPRP
101: FLPFPEQPLP QPPQESFPQP PQSYPQPPLQ PFPQPPQESF PQPPQSYPQP LLQPFPQPPQ QQYPEQPQQP FPRPPQEQFP NQPQQPFPWQ QPSIQLYLQQ
201: QLNPCKEFLL QQCRPVSLVS YLWSKIVQQS NCQVMQEQCC LQLAQIPEQY KCTTIDSIVH AIFMQQGQRQ GVQIVQQQPQ PQEVGQCVLV QGRDIVQPQQ
301: LAQMEAIRSL VLQSVPAMCN FNVPPNCSTM RAPFFSLVNA GML
101: FLPFPEQPLP QPPQESFPQP PQSYPQPPLQ PFPQPPQESF PQPPQSYPQP LLQPFPQPPQ QQYPEQPQQP FPRPPQEQFP NQPQQPFPWQ QPSIQLYLQQ
201: QLNPCKEFLL QQCRPVSLVS YLWSKIVQQS NCQVMQEQCC LQLAQIPEQY KCTTIDSIVH AIFMQQGQRQ GVQIVQQQPQ PQEVGQCVLV QGRDIVQPQQ
301: LAQMEAIRSL VLQSVPAMCN FNVPPNCSTM RAPFFSLVNA GML
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.