Factsheet for TraesCS1A01G007400.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

endoplasmic reticulum 4
plasma membrane 4
vacuole 5
golgi 4
extracellular 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G001400.1	Wheat	nucleus	60.67	89.66
TraesCS1B01G010500.1	Wheat	extracellular	78.33	79.12
TraesCS1B01G010400.1	Wheat	golgi	79.33	78.81
TraesCS1A01G007300.1	Wheat	nucleus, plastid	64.0	76.8
HORVU1Hr1G000680.1	Barley	vacuole	41.33	57.41
HORVU1Hr1G000700.1	Barley	extracellular, vacuole	58.33	51.02
TraesCS6A01G049800.1	Wheat	extracellular	39.33	42.29
TraesCS6A01G049100.1	Wheat	vacuole	39.67	42.05
TraesCS6A01G049400.1	Wheat	plastid	39.33	41.55
TraesCS1A01G007200.1	Wheat	nucleus, plastid	28.33	41.26
TraesCS6A01G049500.1	Wheat	vacuole	31.67	41.13
TraesCS6A01G049600.1	Wheat	vacuole	39.0	40.77
TraesCS6A01G049700.1	Wheat	vacuole	40.33	40.74
TraesCS1A01G007700.1	Wheat	golgi	26.33	39.5
TraesCS6A01G048900.1	Wheat	vacuole	41.33	38.99
TraesCS6A01G049200.1	Wheat	vacuole	39.67	38.89

Protein Annotations

EnsemblPlants:TraesCS1A01G007400.1	EnsemblPlantsGene:TraesCS1A01G007400	Gene3D:1.10.110.10	GO:GO:0003674	GO:GO:0045735	InterPro:Bifun_inhib/LTP/seed_sf
InterPro:Bifunc_inhib/LTP/seed_store	InterPro:Glia_glutenin	PANTHER:PTHR33454	PFAM:PF13016	PRINTS:PR00208	PRINTS:PR00209
SEG:seg	SignalP:SignalP-noTM	SMART:SM00499	SUPFAM:SSF47699	TIGR:cd00261	MapMan:35.1

Description

No Description!

Coordinates

chr1A:+:4033339..4042181

Molecular Weight (calculated)

34481.4 Da

IEP (calculated)

8.405

GRAVY (calculated)

-0.731

Length

300 amino acids

Sequence
(BLAST)

001: MKTLFILTIL AMATTIATAN MQVDPSGQVQ WPQQQPFRQP QQPFYQQPQH TFPQPQQTFP HQPQQQFPQP QQTFPHQPQQ QFPQPQQPQQ QFPQPQQPQQ
101: PFPQPQQAQL PFPQQPQQPF PQPQQPQQPF PQSQQPQQPF PQPQQPQQSF PQQQQPLIQP YLQQQMNPCK NYLLQQCNPV SLVSSLVSMI LPRSDCQVMQ
201: QQCCQQLAQI PRQLQCAAIH SVVHSIVMQQ EQQQGIQILR PLFQLVQGQG IIQPQQPAQY EVIRSLVLRT LPNMCNVYVR PDCSTINAPF ASIVAGISGQ

Best Arabidopsis Sequence Match ( AT1G49490.2 )
(BLAST)

001: MIKTKMERPF GCFFILLLIS YTVVATFDDE PSFPENADLT KDLEQKCFSI NKVDPNLKFE NDRLKRAYIA LQAWKKAIYS DPFKTTANWV GSDVCSYNGV
101: YCAPALDDDS LTVVAGVDLN HADIAGHLPP ELGLMTDLAL FHINSNRFCG IIPKSLSKLA LMYEFDVSNN RFVGQFPEVS LSWPSLKFLD LRYNEFEGSL
201: PSEIFDKDLD AIFLNNNRFE SVIPGTIGKS KASVVTFANN KFSGCIPKSI GNMKNLNEIV FTGNNLTGCF PNEIGLLNNV TVFDASKNGF VGSLPSTLSG
301: LASVEQLDLS HNKLTGFVVD KFCKLPNLDS FKFSYNFFNG EAESCVPGRN NGKQFDDTNN CLQNRPSQKP AKQCLPVVSR PVDCSKDKCS GGSNGGSSPS
401: PNPPRTSEPK PSKPEPVMPK PSDSSKPETP KTPEQPSPKP QPPKHESPKP EEPENKHELP KQKESPKPQP SKPEDSPKPE QPKPEESPKP EQPQIPEPTK
501: PVSPPNEAQG PTPDDPYDAS PVKNRRSPPP PKVEDTRVPP PQPPMPSPSP PSPIYSPPPP VHSPPPPVYS SPPPPHVYSP PPPVASPPPP SPPPPVHSPP
601: PPPVFSPPPP VFSPPPPSPV YSPPPPSHSP PPPVYSPPPP TFSPPPTHNT NQPPMGAPTP TQAPTPSSET TQVPTPSSES DQSQILSPVQ APTPVQSSTP
701: SSEPTQVPTP SSSESYQAPN LSPVQAPTPV QAPTTSSETS QVPTPSSESN QSPSQAPTPI LEPVHAPTPN SKPVQSPTPS SEPVSSPEQS EEVEAPEPTP
801: VNPSSVPSSS PSTDTSIPPP ENNDDDDDGD FVLPPHIGFQ YASPPPPMFQ GY

Arabidopsis Description

Leucine-rich repeat (LRR) family protein [Source:TAIR;Acc:AT1G49490]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.