Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- plasma membrane 5
- vacuole 7
- golgi 5
- extracellular 6
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G153800.1 | Wheat | vacuole | 89.94 | 97.28 |
| TraesCSU01G160200.1 | Wheat | vacuole | 68.55 | 94.37 |
| TraesCS6A01G049400.1 | Wheat | plastid | 76.42 | 85.56 |
| TraesCS6A01G049100.1 | Wheat | vacuole | 76.1 | 85.51 |
| TraesCS6A01G049800.1 | Wheat | extracellular | 74.84 | 85.3 |
| TraesCS6A01G049600.1 | Wheat | vacuole | 76.73 | 85.02 |
| TraesCS6A01G049200.1 | Wheat | vacuole | 80.82 | 83.99 |
| TraesCS6A01G049500.1 | Wheat | vacuole | 60.69 | 83.55 |
| TraesCS6A01G049700.1 | Wheat | vacuole | 77.67 | 83.17 |
| TraesCS1A01G007700.1 | Wheat | golgi | 29.87 | 47.5 |
| TraesCS1A01G007300.1 | Wheat | nucleus, plastid | 33.96 | 43.2 |
| TraesCS1A01G007200.1 | Wheat | nucleus, plastid | 27.36 | 42.23 |
| TraesCS1A01G007400.1 | Wheat | extracellular | 38.99 | 41.33 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G048900.1 | EnsemblPlantsGene:TraesCS6A01G048900 | GO:GO:0003674 | GO:GO:0045735 | InterPro:Bifun_inhib/LTP/seed_sf | InterPro:Bifunc_inhib/LTP/seed_store |
| InterPro:Glia_glutenin | ncoils:Coil | PFAM:PF00234 | PRINTS:PR00208 | PRINTS:PR00209 | SEG:seg |
| SignalP:SignalP-noTM | SMART:SM00499 | SUPFAM:SSF47699 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr6A:+:24921546..24922742
Molecular Weight (calculated)
36534.3 Da
IEP (calculated)
7.247
GRAVY (calculated)
-0.874
Length
318 amino acids
Sequence
(BLAST)
(BLAST)
001: MKTFLIISLL AIVATTATTA VRVPVPQLQP QNPSLQQPQE QVPLVQQQQF PGQQQTFPPQ QPYPQPQPFP GQQPYPQPQL FPQPQPFPPQ LPYPQPQPFP
101: PQQPYPQPQT HHLQPQQPIS QQQVQQQQQQ QQQQQQQQQQ QQQQQQQLLL QQQILQQILQ QQQLIPCRDV IVLQQHNIAH ESSQVLQQSS YQVLQQLCCQ
201: QLRLIPEQSR CQAIHNVVHA IILHQQQQQQ QQQQQQGQHQ PSSQVSYQQP QQQYPSGQGS FQPSQQNPQA QGFVQPQHLP QLEEISNLAL QTLPAMCNVY
301: IPPYCSTTIA PFGIFGTN
101: PQQPYPQPQT HHLQPQQPIS QQQVQQQQQQ QQQQQQQQQQ QQQQQQQLLL QQQILQQILQ QQQLIPCRDV IVLQQHNIAH ESSQVLQQSS YQVLQQLCCQ
201: QLRLIPEQSR CQAIHNVVHA IILHQQQQQQ QQQQQQGQHQ PSSQVSYQQP QQQYPSGQGS FQPSQQNPQA QGFVQPQHLP QLEEISNLAL QTLPAMCNVY
301: IPPYCSTTIA PFGIFGTN
001: MECRSLDLTI ISAEDLKDVQ LIGKQDLYAV VSINGDARTK QKTKVDKDCG TKPKWKHQMK LTVDDAAARD NRLTLVFEIV ADRPIAGDKP VGEVSVPVKE
101: LLDQNKGDEE KTVTYAVRLP NGKAKGSLKF SFKFGEKYTY GSSSGPHAPV PSAMDHKTMD QPVTAYPPGH GAPSAYPAPP AGPSSGYPPQ GHDDKHDGVY
201: GYPQQAGYPA GTGGYPPPGA YPQQGGYPGY PPQQQGGYPG YPPQGPYGYP QQGYPPQGPY GYPQQQAHGK PQKPKKHGKA GAGMGLGLGL GAGLLGGLLV
301: GEAVSDIADM GDMGDMGDMG GFDF
101: LLDQNKGDEE KTVTYAVRLP NGKAKGSLKF SFKFGEKYTY GSSSGPHAPV PSAMDHKTMD QPVTAYPPGH GAPSAYPAPP AGPSSGYPPQ GHDDKHDGVY
201: GYPQQAGYPA GTGGYPPPGA YPQQGGYPGY PPQQQGGYPG YPPQGPYGYP QQGYPPQGPY GYPQQQAHGK PQKPKKHGKA GAGMGLGLGL GAGLLGGLLV
301: GEAVSDIADM GDMGDMGDMG GFDF
Arabidopsis Description
SRC2Protein SRC2 homolog [Source:UniProtKB/Swiss-Prot;Acc:O04023]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.