Factsheet for TraesCS6A01G049800.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

endoplasmic reticulum 5
plasma membrane 5
vacuole 6
golgi 5
extracellular 7
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G049600.1	Wheat	vacuole	98.92	96.17
TraesCS6A01G049400.1	Wheat	plastid	97.85	96.13
TraesCS6A01G049100.1	Wheat	vacuole	96.77	95.41
TraesCS6A01G049500.1	Wheat	vacuole	74.91	90.48
TraesCS6A01G049700.1	Wheat	vacuole	95.7	89.9
TraesCS6A01G049200.1	Wheat	vacuole	97.13	88.56
TraesCS6B01G065600.1	Wheat	endoplasmic reticulum, extracellular	71.33	81.89
TraesCS6A01G048900.1	Wheat	vacuole	85.3	74.84
TraesCS6B01G065900.1	Wheat	plastid	27.24	58.91
TraesCS1A01G007700.1	Wheat	golgi	32.26	45.0
TraesCS1A01G007200.1	Wheat	nucleus, plastid	31.18	42.23
TraesCS1A01G007300.1	Wheat	nucleus, plastid	37.63	42.0
TraesCS1A01G007400.1	Wheat	extracellular	42.29	39.33

Protein Annotations

EnsemblPlants:TraesCS6A01G049800.1	EnsemblPlantsGene:TraesCS6A01G049800	Gene3D:1.10.110.10	GO:GO:0003674	GO:GO:0045735	InterPro:Bifun_inhib/LTP/seed_sf
InterPro:Bifunc_inhib/LTP/seed_store	InterPro:Glia_glutenin	ncoils:Coil	PFAM:PF00234	PRINTS:PR00208	PRINTS:PR00209
SEG:seg	SignalP:SignalP-noTM	SMART:SM00499	SUPFAM:SSF47699	TIGR:cd00261	MapMan:35.1

Description

No Description!

Coordinates

chr6A:+:25581073..25582152

Molecular Weight (calculated)

32043.2 Da

IEP (calculated)

6.998

GRAVY (calculated)

-0.711

Length

279 amino acids

Sequence
(BLAST)

001: MKTFLILALL AIVATTATTA VRVPVPQLQP QNPSQQQPQE QVPLVQQQQF LGQQQPFPPQ QPYPQPQPFP SQQPYLQLQP FPQPQLPYSQ PQPFRPQQPY
101: PQPQPQYSQP QEPISQQQQQ QQQQQQILQQ ILQQQLIPCM DVVLQQHNIA HGRSQVLQQS TYQLLQELCC QHLWQIPEQS QCQAIQNVVH AIILHQQQKQ
201: QQQPSSQVSF QQPLQQYPLG QGSFRPSQQN PQDQGSVQPQ QLPQFEEIRN LALQTLPAMC NVYIPPYCTI APFGIFGTN

Best Arabidopsis Sequence Match ( AT1G62970.1 )
(BLAST)

001: MMSHGGGGGV SNGGGGDAER MLAQAEKLLL SGDLNGSKTY AIRACEADHS LVDHAELILA VADTLVAGES RIRGTTSDLP DWYAVLRLVR LTHNPELVAT
101: QYSRLAVLLN PSRNRYPYSE QAFRLISDAW YVLSDPSRKT LYDRELHLSQ FGQLGQLGFQ LFNQTPQSQS QSPQHHQQQS QSPQHPNQNQ TVSFQNQQLP
201: FQLHQPHFAQ AVQTQSQSQQ QRSQFDQQLL QEQQQASWRQ QVGQEHSSGS SGDWKRPVEE VRLINLNNAT ERVQSSRRFA EPERPPSRSF EGSSHRTPST
301: ELTWASKPTP VSEPVRHSEL VPWQYSEPAR QYQLSSRSSE AAQLSLLPSV SDSSHASQPT RSNQSHAVSK PQPVSKPHPP FPMSQPPPTS NPFPLSQPPS
401: NSKPFPMSQS SQNSKPFPVS QSSQKSKPLL VSQSSQRSKP LPVSQSLQNS NPFPVSQPSS NSKPFPVSQP QPASNPFPVS QPRPNSQPFS MSQPSSTARP
501: FPASQPPAAS KSFPISQPPT TSKPFVSQPP NTSKPMPVSQ PPTTSKPLPV SQPPPTFQST CPSQPPAASS SLSPLPPVFN STQSFQSPPV STTPSAVPEA
601: STIPSPPAPA PVAQPTHVFN QTPPPEQTPK SGAARTDSEP EVSSFWTTCP YCYVLYEYPI IYEESVLKCQ TKSCRRAYQA VKVPSPPPVA EEDSYYCCWG
701: FYPIGFSEVV TKIPVTGLHT KIPVSDLPKS APKKPSPKVY YYDDEEEDDD SYIGSDPSED DDDDDWLMNG TKRRKNVKQS KAKATTKPKR QKVIEVD

Arabidopsis Description

Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WQM3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.