Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 4
- plasma membrane 4
- vacuole 5
- golgi 4
- extracellular 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G011000.1 | Wheat | endoplasmic reticulum | 90.27 | 92.44 |
| TraesCS1D01G001100.1 | Wheat | nucleus, plastid | 86.91 | 87.8 |
| TraesCS1D01G001400.1 | Wheat | nucleus | 59.06 | 86.7 |
| TraesCS1D01G001200.1 | Wheat | extracellular | 84.23 | 76.76 |
| HORVU1Hr1G000680.1 | Barley | vacuole | 43.96 | 60.65 |
| HORVU1Hr1G000700.1 | Barley | extracellular, vacuole | 59.06 | 51.31 |
| TraesCS1D01G000700.1 | Wheat | unclear | 28.19 | 41.79 |
| TraesCS1D01G001300.1 | Wheat | vacuole | 43.62 | 40.12 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G001000.1 | EnsemblPlantsGene:TraesCS1D01G001000 | Gene3D:1.10.110.10 | GO:GO:0003674 | GO:GO:0045735 | InterPro:Bifun_inhib/LTP/seed_sf |
| InterPro:Bifunc_inhib/LTP/seed_store | InterPro:Glia_glutenin | PANTHER:PTHR33454 | PFAM:PF13016 | PRINTS:PR00208 | PRINTS:PR00209 |
| SEG:seg | SignalP:SignalP-noTM | SMART:SM00499 | SUPFAM:SSF47699 | TIGR:cd00261 | MapMan:35.1 |
Description
No Description!
Coordinates
chr1D:-:250379..251430
Molecular Weight (calculated)
33894.8 Da
IEP (calculated)
8.409
GRAVY (calculated)
-0.638
Length
298 amino acids
Sequence
(BLAST)
(BLAST)
001: MKTLLIQTIL VMAITIATAN MQVDPSGQVP WPQQQPFPQP HQPFSQQPQQ TFPQPQQTFP HQPQQQFSQP QQPQQQFIQP QQPFPQQPQQ TYPQRPQQPF
101: PQTQQPQQPF PQSQQPQQPF PQPQQQFPQP QQPQQSFPQQ QPSLIQQSLQ QQLNPCKNFL LQQCKPVSLV SSLWSMILPR SDCQVMRQQC CQQLAQIPQQ
201: LQCAAIHSIV HSIIMQQEQQ EQRQGVQILV PLSQQQQVGQ GTLVQGQGII QPQQPAQLEV IRSLVLQTLA TMCNVYVPPY CSTIRAPFAS IVAGIGGQ
101: PQTQQPQQPF PQSQQPQQPF PQPQQQFPQP QQPQQSFPQQ QPSLIQQSLQ QQLNPCKNFL LQQCKPVSLV SSLWSMILPR SDCQVMRQQC CQQLAQIPQQ
201: LQCAAIHSIV HSIIMQQEQQ EQRQGVQILV PLSQQQQVGQ GTLVQGQGII QPQQPAQLEV IRSLVLQTLA TMCNVYVPPY CSTIRAPFAS IVAGIGGQ
001: MASSKMFLVA SLLMALMFSS MITSSRAAQQ FTKKQTLKPK YFRPRFPQFP RPGFPNNPAL PSFPQFPRPG FPTNPMPFPQ FPRPGFPSNP TPEFPQFPGQ
101: SFPKFPFSSP FSQYPKPAMP GSPVTALSAP PLSLELQLPS LKLSPPNLMA YVKIIINIS
101: SFPKFPFSSP FSQYPKPAMP GSPVTALSAP PLSLELQLPS LKLSPPNLMA YVKIIINIS
Arabidopsis Description
unknown protein; LOCATED IN: endomembrane system; Has 3456 Blast hits to 2147 proteins in 337 species: Archae - 4; Bacteria - 491; Metazoa - 997; Fungi - 201; Plants - 1105; Viruses - 207; Other Eukaryotes - 451 (source: NCBI BLink). [Source:TAIR;Acc:AT4G33585]
SUBAcon: [vacuole,extracellular]
SUBAcon: [vacuole,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.