Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 4
- plasma membrane 4
- vacuole 5
- golgi 4
- extracellular 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G001100.1 | Wheat | nucleus, plastid | 78.59 | 87.12 |
| TraesCS1D01G001000.1 | Wheat | extracellular | 76.76 | 84.23 |
| TraesCS1B01G010700.1 | Wheat | cytosol | 31.5 | 83.74 |
| TraesCS1B01G010800.1 | Wheat | vacuole | 87.46 | 83.63 |
| TraesCS1D01G001400.1 | Wheat | nucleus | 49.54 | 79.8 |
| HORVU1Hr1G000680.1 | Barley | vacuole | 39.76 | 60.19 |
| HORVU1Hr1G000700.1 | Barley | extracellular, vacuole | 55.66 | 53.06 |
| TraesCS1D01G000700.1 | Wheat | unclear | 25.99 | 42.29 |
| TraesCS1D01G001300.1 | Wheat | vacuole | 40.98 | 41.36 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G001200.1 | EnsemblPlantsGene:TraesCS1D01G001200 | Gene3D:1.10.110.10 | GO:GO:0003674 | GO:GO:0045735 | InterPro:Bifun_inhib/LTP/seed_sf |
| InterPro:Bifunc_inhib/LTP/seed_store | InterPro:Glia_glutenin | PANTHER:PTHR33454 | PFAM:PF13016 | PRINTS:PR00208 | PRINTS:PR00209 |
| SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF47699 | TIGR:cd00261 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr1D:-:321828..322964
Molecular Weight (calculated)
37160.7 Da
IEP (calculated)
8.221
GRAVY (calculated)
-0.699
Length
327 amino acids
Sequence
(BLAST)
(BLAST)
001: MKTLLILTIL AMAITIGTAN IQVDPSGQVQ WLQQQLVPQL QQPLSQQPQQ TFPQPQQTFP HQPQQQVPQP QQPQQPFLQP QQPFPQQPQQ PFPQTQQPQQ
101: PFPQQPQQPF PQTQQPQQPF PQQPQQPFPQ TQQPQQPFPQ LQQPQQPFPQ PQQQLPQPQQ PQQSFPQQQR SFIQPSLQQQ LNPCKNILLQ QCKPASLVSS
201: LWSIIWPQSD CQVMRQQCCQ QLAQIPQQLQ CAAIHSVVHS IIMQQQQQQQ QQQGMHIFLP LSQQQQVGQG SLVQGQGIIQ PQQPAQLEAI RSLVLQTLPS
301: MCNVYVPPEC SIMRAPFASI VAGIGGQ
101: PFPQQPQQPF PQTQQPQQPF PQQPQQPFPQ TQQPQQPFPQ LQQPQQPFPQ PQQQLPQPQQ PQQSFPQQQR SFIQPSLQQQ LNPCKNILLQ QCKPASLVSS
201: LWSIIWPQSD CQVMRQQCCQ QLAQIPQQLQ CAAIHSVVHS IIMQQQQQQQ QQQGMHIFLP LSQQQQVGQG SLVQGQGIIQ PQQPAQLEAI RSLVLQTLPS
301: MCNVYVPPEC SIMRAPFASI VAGIGGQ
001: MDSSKLSSLS LCLFLICIIY LPQHSLACGS CNPRKGGKHS PKAPKLPVPP VTVPKLPVPP VTVPKLPVPP VTVPKLPVPP VTIPKLPVPP VTVPKLPVPP
101: VTVPKLPVPP VTVPKLPVPP VTVPKLPVPP VTVPKLPVPP VTVPKLPLPP ISGLPIPPVV GPNLPLPPLP IVGPILPPGT TPPATGGKDC PPPPGSVKPP
201: SGGGKATCPI DTLKLGACVD LLGGLVKIGL GDPAVNKCCP LLKGLVEVEA AACLCTTLKL KALDLNLYVP VALQLLLTCG KNPPPGYTCS I
101: VTVPKLPVPP VTVPKLPVPP VTVPKLPVPP VTVPKLPVPP VTVPKLPLPP ISGLPIPPVV GPNLPLPPLP IVGPILPPGT TPPATGGKDC PPPPGSVKPP
201: SGGGKATCPI DTLKLGACVD LLGGLVKIGL GDPAVNKCCP LLKGLVEVEA AACLCTTLKL KALDLNLYVP VALQLLLTCG KNPPPGYTCS I
Arabidopsis Description
At2g10940/F15K19.1 [Source:UniProtKB/TrEMBL;Acc:Q9SKI0]
SUBAcon: [plasma membrane,endoplasmic reticulum]
SUBAcon: [plasma membrane,endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.