Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- plasma membrane 4
- vacuole 6
- golgi 4
- extracellular 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G010600.1 | Wheat | vacuole | 82.41 | 84.23 |
| TraesCS1A01G007200.1 | Wheat | nucleus, plastid | 51.85 | 81.55 |
| HORVU1Hr1G000640.1 | Barley | vacuole | 60.19 | 61.13 |
| TraesCS1D01G001100.1 | Wheat | nucleus, plastid | 39.81 | 43.73 |
| TraesCS1D01G001000.1 | Wheat | extracellular | 40.12 | 43.62 |
| TraesCS1D01G000700.1 | Wheat | unclear | 26.23 | 42.29 |
| TraesCS1D01G001400.1 | Wheat | nucleus | 25.93 | 41.38 |
| TraesCS1D01G001200.1 | Wheat | extracellular | 41.36 | 40.98 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G001300.1 | EnsemblPlantsGene:TraesCS1D01G001300 | Gene3D:1.10.110.10 | GO:GO:0003674 | GO:GO:0045735 | InterPro:Bifun_inhib/LTP/seed_sf |
| InterPro:Bifunc_inhib/LTP/seed_store | InterPro:Glia_glutenin | PFAM:PF13016 | PRINTS:PR00208 | PRINTS:PR00209 | SEG:seg |
| SignalP:SignalP-noTM | SMART:SM00499 | SUPFAM:SSF47699 | TIGR:cd00261 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr1D:-:339758..340882
Molecular Weight (calculated)
37665.1 Da
IEP (calculated)
7.030
GRAVY (calculated)
-0.866
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: MKIFMVFALL VASTTITTAT AQLDPRIHDQ ERPQQSFLQQ QPLIQQQPYP PQEPQQPLFP QKEPQQPFPL QQPQYQQQQP YPQQPLPQEQ LPQQHLFPQQ
101: PPQQQFPQQM PLPHQQQTFP QQQQQQEQLP QQQPQFPQQQ PFSQYQQPLT QQPYSQEQPL PQQQPSVEEK QQLNLCKEFL LQQCNPEEKL SLLQSVIPFL
201: RPKTSQQNSC QLKRLQCCRQ LAHISEPSRC PAIHNIVHAI VMQQQHVDRG FGQPQPQQLG QEMPMQPQHQ LGQHSILPQQ LAQYQLVRLL VIQTLPMLCN
301: VHVPSDCYTI TAPFGSMTAY NGGQ
101: PPQQQFPQQM PLPHQQQTFP QQQQQQEQLP QQQPQFPQQQ PFSQYQQPLT QQPYSQEQPL PQQQPSVEEK QQLNLCKEFL LQQCNPEEKL SLLQSVIPFL
201: RPKTSQQNSC QLKRLQCCRQ LAHISEPSRC PAIHNIVHAI VMQQQHVDRG FGQPQPQQLG QEMPMQPQHQ LGQHSILPQQ LAQYQLVRLL VIQTLPMLCN
301: VHVPSDCYTI TAPFGSMTAY NGGQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.