Factsheet for TraesCSU01G108600.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

endoplasmic reticulum 5
plasma membrane 5
vacuole 7
golgi 5
extracellular 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G108500.1	Wheat	vacuole	96.51	87.06
TraesCSU01G108400.1	Wheat	vacuole	97.29	85.67
TraesCSU01G220600.1	Wheat	extracellular	96.12	85.52
TraesCSU01G108100.1	Wheat	plastid	95.74	84.88
TraesCSU01G220200.1	Wheat	nucleus	96.12	83.5
TraesCSU01G108300.1	Wheat	vacuole	96.12	82.67
TraesCSU01G188800.1	Wheat	plastid, vacuole	98.06	82.41
TraesCSU01G239000.1	Wheat	vacuole	97.67	81.82
TraesCSU01G108700.1	Wheat	plastid	88.76	81.21
TraesCSU01G108200.1	Wheat	vacuole	97.67	79.75
TraesCSU01G153800.1	Wheat	vacuole	86.82	76.19
TraesCS6B01G086500.1	Wheat	vacuole	88.76	72.93
TraesCSU01G160200.1	Wheat	vacuole	64.34	71.86

Protein Annotations

EnsemblPlants:TraesCSU01G108600.1	EnsemblPlantsGene:TraesCSU01G108600	Gene3D:1.10.110.10	GO:GO:0003674	GO:GO:0045735	InterPro:Bifun_inhib/LTP/seed_sf
InterPro:Glia_glutenin	ncoils:Coil	PANTHER:PTHR33454	PRINTS:PR00208	PRINTS:PR00209	SEG:seg
SignalP:SignalP-noTM	SUPFAM:SSF47699	TIGR:cd00261	MapMan:35.1	:	:

Description

No Description!

Coordinates

chrUn:+:94456933..94457964

Molecular Weight (calculated)

29465.0 Da

IEP (calculated)

7.552

GRAVY (calculated)

-0.784

Length

258 amino acids

Sequence
(BLAST)

001: MKTFLILALL AIVATTATIA VRVPVPQLQP QNPSQQQPQE QVPLVQQQQF PGQQQPFPPQ QPYPQPQPFP SQQPYLQLQP FPQPQLPYPQ PQPFRPQQPY
101: PQPQPQYSQP QQPISQQQQQ QQQQQQQQQQ ILQQILQQQL IPCRDVVLQQ HNIAHGSSQV LQQTIHNVVH AIILHQQQQQ QQPLSQVSFQ QPQQQYPSGQ
201: GSFQPSQQNP QAQGSVQPQQ LPQFEEIRNL ALETLPAMCN VYIPPYCTIA QVGIFGTN

Best Arabidopsis Sequence Match ( AT1G62970.1 )
(BLAST)

001: MMSHGGGGGV SNGGGGDAER MLAQAEKLLL SGDLNGSKTY AIRACEADHS LVDHAELILA VADTLVAGES RIRGTTSDLP DWYAVLRLVR LTHNPELVAT
101: QYSRLAVLLN PSRNRYPYSE QAFRLISDAW YVLSDPSRKT LYDRELHLSQ FGQLGQLGFQ LFNQTPQSQS QSPQHHQQQS QSPQHPNQNQ TVSFQNQQLP
201: FQLHQPHFAQ AVQTQSQSQQ QRSQFDQQLL QEQQQASWRQ QVGQEHSSGS SGDWKRPVEE VRLINLNNAT ERVQSSRRFA EPERPPSRSF EGSSHRTPST
301: ELTWASKPTP VSEPVRHSEL VPWQYSEPAR QYQLSSRSSE AAQLSLLPSV SDSSHASQPT RSNQSHAVSK PQPVSKPHPP FPMSQPPPTS NPFPLSQPPS
401: NSKPFPMSQS SQNSKPFPVS QSSQKSKPLL VSQSSQRSKP LPVSQSLQNS NPFPVSQPSS NSKPFPVSQP QPASNPFPVS QPRPNSQPFS MSQPSSTARP
501: FPASQPPAAS KSFPISQPPT TSKPFVSQPP NTSKPMPVSQ PPTTSKPLPV SQPPPTFQST CPSQPPAASS SLSPLPPVFN STQSFQSPPV STTPSAVPEA
601: STIPSPPAPA PVAQPTHVFN QTPPPEQTPK SGAARTDSEP EVSSFWTTCP YCYVLYEYPI IYEESVLKCQ TKSCRRAYQA VKVPSPPPVA EEDSYYCCWG
701: FYPIGFSEVV TKIPVTGLHT KIPVSDLPKS APKKPSPKVY YYDDEEEDDD SYIGSDPSED DDDDDWLMNG TKRRKNVKQS KAKATTKPKR QKVIEVD

Arabidopsis Description

Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WQM3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.