Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G555900.1 | Wheat | cytosol | 52.24 | 92.09 |
| TraesCS5B01G517700.1 | Wheat | plasma membrane | 60.16 | 83.42 |
| HORVU3Hr1G116680.1 | Barley | mitochondrion, plasma membrane | 77.73 | 82.21 |
| Os08t0544400-01 | Rice | plasma membrane | 28.48 | 80.21 |
| OQU80771 | Sorghum | plasma membrane | 67.12 | 76.49 |
| Zm00001d052726_P008 | Maize | cytosol, nucleus, plasma membrane | 75.41 | 73.7 |
| Zm00001d031724_P003 | Maize | plasma membrane | 75.86 | 72.71 |
| GSMUA_Achr1P08050_001 | Banana | cytosol, peroxisome, plasma membrane | 56.65 | 58.31 |
| GSMUA_Achr1P08030_001 | Banana | plasma membrane | 54.19 | 55.81 |
| TraesCSU01G097600.2 | Wheat | plasma membrane | 49.33 | 45.45 |
| Os01t0724500-01 | Rice | plasma membrane | 5.83 | 38.05 |
Protein Annotations
| MapMan:24.1.3.2.2 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABCG_PDR_2 | InterPro:ABC_2_trans | InterPro:ABC_trans_N |
| InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0016887 | InterPro:IPR003439 |
| InterPro:P-loop_NTPase | InterPro:PDR_assoc | PFAM:PF00005 | PFAM:PF01061 | PFAM:PF08370 | PFAM:PF14510 |
| ScanProsite:PS00211 | PFscan:PS50893 | PANTHER:PTHR19241 | PANTHER:PTHR19241:SF214 | SMART:SM00382 | SUPFAM:SSF52540 |
| TMHMM:TMhelix | EnsemblPlantsGene:TraesCSU01G114300 | EnsemblPlants:TraesCSU01G114300.2 | TIGR:cd03232 | : | : |
Description
No Description!
Coordinates
chrUn:-:99101437..99113451
Molecular Weight (calculated)
151668.0 Da
IEP (calculated)
7.898
GRAVY (calculated)
0.118
Length
1338 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAATMAEGEP PPFTHEDNRR FLQMLRDKKQ MLGIGSPKVE VQFQDLTVET YVRIGRRELP TLPNCVVNAA QELASYSHMC TPRKRAVKII NAASGTIRPS
0101: RMTLLLGAPG SGKTTFLKAL AGKLDLSLKR KGKLMYNGDE VNSSTPQHMH AYISQYDLHH AEMTVRETID FASNMLGTNN EFEMIGEAAR RKHDVVNEVD
0201: KNLDSFIKAT TFGEGRNLTT NYIIKILGLS ECTDTLVGDE MRRGISGGQK KRLTIGEMLV GLAKCFFMDD ISTGLDSSTT YEIIKVIQQM AHLLDLTVVI
0301: SLLQPPPETL ELFDDIILLC EGQIVYQGPR ENATDFFEIM GFKCPERKNI ADFLQEVTSM MDQKQYWIGE QHRYHYHSIE KFAESFRSSY LPRLVQDKLL
0401: LPNTNTIKGE VVKTGSGLSR WNVFKACFSR EVLLLKRNSP IHIFTTIQIT ILALVISTIF LRTNMNHKSI LDANKYVGAL FIAVMLVNFN GMIEIAMTIK
0501: RLPTFYKQRE LLALPGWALL TPNFLLSIPI SLMQTGLWTS LTYYLIGYAP SFIRFMKHFL VLFSMHQTSM GMCRLLAAVA RTLVMANVLA TTTLIAIFIF
0601: GGIVISKDDL KQWLQWGYWT SPFAYAQNAI SLNEFLDERW ATEFHYENAN TIGEAILKIR GFLTESHWYW ICVSVLFGFA LVFNILSIFA LEFLNSPHKR
0701: EVHTNATDTM MECATTKNGS HDASIPQGVL PFQPLSFAFD AINYSVDMPK EMMKYGVTEK KLHLLQDVSG AFRPGVLTAL MGITGAGKTT LLDVLAGRKT
0801: GGYIEGTIKV AGYPKKQETF SRISGYCEQS DIHSPNLTVY ESLQFSARLR LPSEVTSHQR DMFIHEVMHL VELTRLKNAM VGLPGATGLS AEQRKRLTMA
0901: VELVASPSII FMDEPTTGLD ARSAAIVMRA VRKTVDTGRT IVCTIHQPSI EIFESFDELL LMKRGGRIIY SGSLGPHSCN MIDYFEAIPC VPRIKEGQNP
1001: AAWMLNVSSN TTEYEIGLDY AEIYRRSSLY KENMILVDEL GKPTPGIEDL HFPPIYWQNF SAQCMACLWK QRCAYWKNPE HNVARFLNTF VQSTMFGVVF
1101: WQTGSTIKQQ QDIFNILGLI YGTSLFLGFN NCTMLQPVVA VERVVLYREK AAGTYSTLAY AIAQVAIELP YMLVQVFMFA AIIYPMIGFQ MTIGKFFEFI
1201: LYMVLSYMYY TLFGMMTVAL TPNVEIASGL VYLIFLFWNV FSGFVVGRLL IPVWWRWAYW ANPSAWTVYA LMFSQLGDRT ELILVPGLPY QTVREFLESY
1301: LGLEDVYMNL VTYLHVAIIA LFTIVFFISL KYLNFQRR
0101: RMTLLLGAPG SGKTTFLKAL AGKLDLSLKR KGKLMYNGDE VNSSTPQHMH AYISQYDLHH AEMTVRETID FASNMLGTNN EFEMIGEAAR RKHDVVNEVD
0201: KNLDSFIKAT TFGEGRNLTT NYIIKILGLS ECTDTLVGDE MRRGISGGQK KRLTIGEMLV GLAKCFFMDD ISTGLDSSTT YEIIKVIQQM AHLLDLTVVI
0301: SLLQPPPETL ELFDDIILLC EGQIVYQGPR ENATDFFEIM GFKCPERKNI ADFLQEVTSM MDQKQYWIGE QHRYHYHSIE KFAESFRSSY LPRLVQDKLL
0401: LPNTNTIKGE VVKTGSGLSR WNVFKACFSR EVLLLKRNSP IHIFTTIQIT ILALVISTIF LRTNMNHKSI LDANKYVGAL FIAVMLVNFN GMIEIAMTIK
0501: RLPTFYKQRE LLALPGWALL TPNFLLSIPI SLMQTGLWTS LTYYLIGYAP SFIRFMKHFL VLFSMHQTSM GMCRLLAAVA RTLVMANVLA TTTLIAIFIF
0601: GGIVISKDDL KQWLQWGYWT SPFAYAQNAI SLNEFLDERW ATEFHYENAN TIGEAILKIR GFLTESHWYW ICVSVLFGFA LVFNILSIFA LEFLNSPHKR
0701: EVHTNATDTM MECATTKNGS HDASIPQGVL PFQPLSFAFD AINYSVDMPK EMMKYGVTEK KLHLLQDVSG AFRPGVLTAL MGITGAGKTT LLDVLAGRKT
0801: GGYIEGTIKV AGYPKKQETF SRISGYCEQS DIHSPNLTVY ESLQFSARLR LPSEVTSHQR DMFIHEVMHL VELTRLKNAM VGLPGATGLS AEQRKRLTMA
0901: VELVASPSII FMDEPTTGLD ARSAAIVMRA VRKTVDTGRT IVCTIHQPSI EIFESFDELL LMKRGGRIIY SGSLGPHSCN MIDYFEAIPC VPRIKEGQNP
1001: AAWMLNVSSN TTEYEIGLDY AEIYRRSSLY KENMILVDEL GKPTPGIEDL HFPPIYWQNF SAQCMACLWK QRCAYWKNPE HNVARFLNTF VQSTMFGVVF
1101: WQTGSTIKQQ QDIFNILGLI YGTSLFLGFN NCTMLQPVVA VERVVLYREK AAGTYSTLAY AIAQVAIELP YMLVQVFMFA AIIYPMIGFQ MTIGKFFEFI
1201: LYMVLSYMYY TLFGMMTVAL TPNVEIASGL VYLIFLFWNV FSGFVVGRLL IPVWWRWAYW ANPSAWTVYA LMFSQLGDRT ELILVPGLPY QTVREFLESY
1301: LGLEDVYMNL VTYLHVAIIA LFTIVFFISL KYLNFQRR
0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR
Arabidopsis Description
ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.