Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P08030_001 | Banana | plasma membrane | 70.46 | 70.52 |
| Os08t0544400-01 | Rice | plasma membrane | 24.15 | 66.11 |
| OQU80771 | Sorghum | plasma membrane | 55.15 | 61.07 |
| TraesCS7A01G106600.1 | Wheat | plasma membrane | 35.85 | 60.13 |
| HORVU7Hr1G056530.12 | Barley | cytosol, nucleus | 61.69 | 59.45 |
| TraesCS7D01G269400.1 | Wheat | cytosol, nucleus, plasma membrane | 61.62 | 59.33 |
| TraesCS7B01G167100.1 | Wheat | cytosol, nucleus, plasma membrane | 61.62 | 59.33 |
| TraesCS7A01G268800.2 | Wheat | cytosol, nucleus, plasma membrane | 61.54 | 59.26 |
| TraesCS4B01G331400.3 | Wheat | plasma membrane | 45.38 | 59.06 |
| HORVU3Hr1G116680.1 | Barley | mitochondrion, plasma membrane | 56.69 | 58.26 |
| Zm00001d052726_P008 | Maize | cytosol, nucleus, plasma membrane | 61.08 | 58.0 |
| TraesCS5A01G502800.1 | Wheat | cytosol, nucleus, plasma membrane | 60.0 | 57.91 |
| TraesCS4B01G332300.3 | Wheat | cytosol, nucleus, plasma membrane | 59.77 | 57.73 |
| TraesCS5B01G517700.1 | Wheat | plasma membrane | 42.77 | 57.62 |
| Zm00001d031724_P003 | Maize | plasma membrane | 61.62 | 57.38 |
| HORVU4Hr1G081040.4 | Barley | cytosol, nucleus, plasma membrane | 59.08 | 56.97 |
| OQU89274 | Sorghum | plasma membrane | 42.92 | 56.94 |
| TraesCS5A01G555900.1 | Wheat | cytosol | 33.08 | 56.65 |
| TraesCSU01G114300.2 | Wheat | cytosol, peroxisome, plasma membrane | 58.31 | 56.65 |
| Zm00001d019961_P001 | Maize | plasma membrane | 45.92 | 56.53 |
| TraesCS7D01G100700.1 | Wheat | plasma membrane | 56.0 | 55.15 |
| TraesCS7B01G005200.1 | Wheat | plasma membrane | 56.0 | 55.11 |
| GSMUA_Achr1P14530_001 | Banana | mitochondrion, plasma membrane | 46.62 | 53.11 |
| GSMUA_Achr9P02950_001 | Banana | plasma membrane | 51.23 | 47.95 |
| GSMUA_Achr6P34530_001 | Banana | plasma membrane | 48.23 | 47.54 |
| GSMUA_Achr5P06180_001 | Banana | plasma membrane | 50.38 | 47.05 |
| GSMUA_AchrUn_... | Banana | mitochondrion, plasma membrane | 50.54 | 46.6 |
| GSMUA_Achr9P01490_001 | Banana | plasma membrane | 51.38 | 44.74 |
| GSMUA_Achr8P07660_001 | Banana | mitochondrion, peroxisome, plasma membrane | 53.0 | 44.54 |
| GSMUA_Achr9P16240_001 | Banana | cytosol, mitochondrion, peroxisome, plasma membrane | 49.92 | 43.27 |
| GSMUA_Achr11P... | Banana | plasma membrane | 47.08 | 42.5 |
| GSMUA_Achr3P01060_001 | Banana | plasma membrane | 43.08 | 41.42 |
| GSMUA_Achr7P08510_001 | Banana | plasma membrane | 49.62 | 40.62 |
| GSMUA_Achr1P18390_001 | Banana | cytosol, nucleus, plasma membrane, plastid | 46.92 | 40.59 |
| GSMUA_Achr11P... | Banana | cytosol, peroxisome, plasma membrane | 43.31 | 38.77 |
| Os01t0724500-01 | Rice | plasma membrane | 5.08 | 32.2 |
Protein Annotations
| MapMan:24.1.3.2.2 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABCG_PDR_2 | InterPro:ABC_2_trans | InterPro:ABC_trans_N |
| InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 |
| EnsemblPlantsGene:GSMUA_Achr1G08050_001 | EnsemblPlants:GSMUA_Achr1P08050_001 | EnsemblPlants:GSMUA_Achr1T08050_001 | InterPro:IPR003439 | UniProt:M0RY13 | InterPro:P-loop_NTPase |
| InterPro:PDR_assoc | PFAM:PF00005 | PFAM:PF01061 | PFAM:PF08370 | PFAM:PF14510 | ScanProsite:PS00211 |
| PFscan:PS50893 | PANTHER:PTHR19241 | PANTHER:PTHR19241:SF214 | SMART:SM00382 | SUPFAM:SSF52540 | TMHMM:TMhelix |
| UniParc:UPI000295C470 | SEG:seg | : | : | : | : |
Description
ABC transporter G family member 39 [Source:GMGC_GENE;Acc:GSMUA_Achr1G08050_001]
Coordinates
chr1:-:6186471..6202317
Molecular Weight (calculated)
147440.0 Da
IEP (calculated)
8.866
GRAVY (calculated)
0.073
Length
1300 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEGSDSAPMT YEEHEELLSC IRDHRARLGV EAPKVEVRFE ELSVETEASV RKRVLPTLPN AVINTAQELM GWLRLYQANR KPVKVLNGLR GIVKPSRMTL
0101: VLGSPGSGKS TFLRALSGKL DPSLNVTGKV AYNGQKMNHY ISQRMCAYVS QYDLHHSEMT VKETMEFSRK MLKAGNEIEM HKAVSTAKIE ASIQEERNIS
0201: AMENDSSKDE GNFITNYILK ILGLHECADI IIGDEMRRGI SGGQKKRVTI GEMLVGLAQC FFMDDISTGL DSSTTFQIIK FLQQMTHVLD LTMVISLLQP
0301: TPEVFELFDD IILLCEGQIA YQGPREDVLS FFESMGLGCP DRKNVADFLQ EVMSKMDQAQ YWMGNKSTYQ YLSVQKFSDS FESSQFGRLL QEQLQKPSSI
0401: EESEQMVKLK EIYNVPKWEI FKACFSREKL LMKRNSPVHI FKTIQIVLLA FVIMTIFLRT KMKHQTVADG YLYMGAIFAG VVIVNLPMSF IEAGLWTSLT
0501: YYVVGFAPSA VRFLQQFLAL FCVHQMSMSL FRFIAVVGRT QLMANTLGTA TLVSIYILGG FVISKDDIQP WLVWGYWLSP MTYGQNAVAI NEFLDQRWNM
0601: KTENGESTGD TVGKTILRSR GMLTEWHWFW YSVMILLLFA LVFNILSIFA LEYLRAPQKS RSNKNMWPKD FKRIAVSDDQ ATTGTSQSRM SLPFQPLKMA
0701: FSNINYYVDM PKQLKKNGMK EDRLQLLQDV SGVFRPGVLT ALMGVTGAGK TTLLDVLAGR KTAGHIEGSI KISGYPKKQE TFARISGYCE QSDNHSPCLT
0801: VFESLWYSAW LRLPSNVDAN TRNIFINEVM ELVELKSLKN AMVGLPGVSG LAAEERKRLT IAVELVSSPS IIFMDEPTTG LDARAAAIVM RTVRKAADTG
0901: RTIVCTIHQP SIDIFEAFDE LLLMKKGGQL IYGGPLGKLS KTMIQYFEGI SGVPKIRDGQ NPATWMLDVT SPNMEYKLGV DFGNIFRNSS AYKRNMKMVD
1001: EMSKRQSNAE DIHFTSKYAK GFWSQCVSCL WKQHRSYWKN PEHNVVRFII TITVSALFGI VFLDIGSKIR MEQDVFNILG AMYGSALFIG FANASVVQPI
1101: VERERTVFYR ERAAGMYSSM PYAIAQVAIE IPYILIQAIL FSVIVYPMIG FPFVAAKFFW FMFFLLLSFI YFVLFGMMTV ALTPNQQIAA LFSFFLFIIW
1201: NMFSGFFVPR KMIPIWWRWY YWADPAAWTV YGLMVSQLGD KEDPLIAAGT SGETVKDFLK GYLGLQESYL PLIVSLHIAV IVLFLFVFGF SIKYLNFQRR
0101: VLGSPGSGKS TFLRALSGKL DPSLNVTGKV AYNGQKMNHY ISQRMCAYVS QYDLHHSEMT VKETMEFSRK MLKAGNEIEM HKAVSTAKIE ASIQEERNIS
0201: AMENDSSKDE GNFITNYILK ILGLHECADI IIGDEMRRGI SGGQKKRVTI GEMLVGLAQC FFMDDISTGL DSSTTFQIIK FLQQMTHVLD LTMVISLLQP
0301: TPEVFELFDD IILLCEGQIA YQGPREDVLS FFESMGLGCP DRKNVADFLQ EVMSKMDQAQ YWMGNKSTYQ YLSVQKFSDS FESSQFGRLL QEQLQKPSSI
0401: EESEQMVKLK EIYNVPKWEI FKACFSREKL LMKRNSPVHI FKTIQIVLLA FVIMTIFLRT KMKHQTVADG YLYMGAIFAG VVIVNLPMSF IEAGLWTSLT
0501: YYVVGFAPSA VRFLQQFLAL FCVHQMSMSL FRFIAVVGRT QLMANTLGTA TLVSIYILGG FVISKDDIQP WLVWGYWLSP MTYGQNAVAI NEFLDQRWNM
0601: KTENGESTGD TVGKTILRSR GMLTEWHWFW YSVMILLLFA LVFNILSIFA LEYLRAPQKS RSNKNMWPKD FKRIAVSDDQ ATTGTSQSRM SLPFQPLKMA
0701: FSNINYYVDM PKQLKKNGMK EDRLQLLQDV SGVFRPGVLT ALMGVTGAGK TTLLDVLAGR KTAGHIEGSI KISGYPKKQE TFARISGYCE QSDNHSPCLT
0801: VFESLWYSAW LRLPSNVDAN TRNIFINEVM ELVELKSLKN AMVGLPGVSG LAAEERKRLT IAVELVSSPS IIFMDEPTTG LDARAAAIVM RTVRKAADTG
0901: RTIVCTIHQP SIDIFEAFDE LLLMKKGGQL IYGGPLGKLS KTMIQYFEGI SGVPKIRDGQ NPATWMLDVT SPNMEYKLGV DFGNIFRNSS AYKRNMKMVD
1001: EMSKRQSNAE DIHFTSKYAK GFWSQCVSCL WKQHRSYWKN PEHNVVRFII TITVSALFGI VFLDIGSKIR MEQDVFNILG AMYGSALFIG FANASVVQPI
1101: VERERTVFYR ERAAGMYSSM PYAIAQVAIE IPYILIQAIL FSVIVYPMIG FPFVAAKFFW FMFFLLLSFI YFVLFGMMTV ALTPNQQIAA LFSFFLFIIW
1201: NMFSGFFVPR KMIPIWWRWY YWADPAAWTV YGLMVSQLGD KEDPLIAAGT SGETVKDFLK GYLGLQESYL PLIVSLHIAV IVLFLFVFGF SIKYLNFQRR
0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR
Arabidopsis Description
ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.