Factsheet for GSMUA_Achr9P16240_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, cytosol, plasma membrane

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 2
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	plasma membrane	84.53	88.06
OQU76555	Sorghum	mitochondrion, plasma membrane	69.07	80.12
TraesCS7B01G271500.1	Wheat	cytosol	32.73	79.97
Os06t0554800-01	Rice	plasma membrane	61.93	79.61
HORVU7Hr1G088630.1	Barley	vacuole	68.2	78.69
Zm00001d036986_P002	Maize	plasma membrane	76.8	76.39
TraesCS7A01G356200.1	Wheat	plasma membrane	60.47	76.03
Zm00001d046277_P002	Maize	cytosol, nucleus, plasma membrane	77.73	75.71
PGSC0003DMT400006729	Potato	plastid	74.73	74.73
Solyc03g120980.2.1	Tomato	plastid	74.27	74.27
CDY69529	Canola	plasma membrane	35.13	73.81
CDX67921	Canola	plasma membrane, plastid	67.73	73.09
KRH23404	Soybean	plasma membrane	72.0	72.63
CDY70099	Canola	cytosol	20.8	72.56
AT3G16340.1	Thale cress	plasma membrane	68.07	72.1
CDY30162	Canola	plasma membrane	42.67	71.99
Bra003527.1-P	Field mustard	plasma membrane, plastid	68.93	71.81
CDX97743	Canola	plasma membrane	67.47	71.62
CDY39621	Canola	plastid	68.13	71.17
CDY36534	Canola	plastid	67.8	70.87
Bra021173.1-P	Field mustard	plasma membrane	66.67	70.77
AT1G59870.1	Thale cress	plasma membrane, plastid	69.2	70.66
Bra026156.1-P	Field mustard	plastid	67.87	70.5
Bra016669.1-P	Field mustard	plastid	67.2	70.15
CDY20193	Canola	plasma membrane, plastid	64.73	70.06
CDX83991	Canola	plastid	67.2	68.66
CDY68747	Canola	plastid	37.53	65.85
CDY69102	Canola	plastid	37.2	65.49
GSMUA_Achr1P14530_001	Banana	mitochondrion, plasma membrane	49.13	64.59
GSMUA_Achr5P06180_001	Banana	plasma membrane	57.2	61.64
GSMUA_Achr9P02950_001	Banana	plasma membrane	57.0	61.56
GSMUA_Achr6P34530_001	Banana	plasma membrane	52.87	60.12
GSMUA_AchrUn_...	Banana	mitochondrion, plasma membrane	56.33	59.93
GSMUA_Achr9P01490_001	Banana	plasma membrane	56.47	56.73
GSMUA_Achr8P07660_001	Banana	mitochondrion, peroxisome, plasma membrane	56.0	54.3
Bra027171.1-P	Field mustard	plasma membrane	67.33	52.55
GSMUA_Achr3P01060_001	Banana	plasma membrane	47.0	52.15
GSMUA_Achr7P08510_001	Banana	plasma membrane	54.0	51.01
GSMUA_Achr1P08050_001	Banana	cytosol, peroxisome, plasma membrane	43.27	49.92
GSMUA_Achr1P18390_001	Banana	cytosol, nucleus, plasma membrane, plastid	49.53	49.43
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plasma membrane	47.4	48.97
GSMUA_Achr1P08030_001	Banana	plasma membrane	40.53	46.81

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABCG_PDR_1	InterPro:ABCG_PDR_2	InterPro:ABC_2_trans
InterPro:ABC_trans_N	InterPro:ABC_transporter-like	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887
EnsemblPlantsGene:GSMUA_Achr9G16240_001	EnsemblPlants:GSMUA_Achr9P16240_001	EnsemblPlants:GSMUA_Achr9T16240_001	InterPro:IPR003439	UniProt:M0U0T1	InterPro:P-loop_NTPase
InterPro:PDR_assoc	PFAM:PF00005	PFAM:PF01061	PFAM:PF08370	PFAM:PF14510	PFscan:PS50893
PANTHER:PTHR19241	PANTHER:PTHR19241:SF224	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0002969CFB
SEG:seg	:	:	:	:	:

Description

Pleiotropic drug resistance protein 12 [Source:GMGC_GENE;Acc:GSMUA_Achr9G16240_001]

Coordinates

chr9:-:10941454..10948799

Molecular Weight (calculated)

169810.0 Da

IEP (calculated)

8.382

GRAVY (calculated)

-0.004

Length

1500 amino acids

Sequence
(BLAST)

0001: MEGMERAWDS GRRASRSLSR SISRGMGMGN WGMEDVFARS STRGRSWGSR SGVDDDEEAL RWAALEKLPT YSRLRTGILR SVVAEGEQGR RQYQHKEVDV
0101: RKLGVNERQE FIERVFKVAE EDNERFLKKL RNRIDKVGIQ LPTVEVRFEH LNVEAKCHVG NRALPSLANT ARDIAESAVG LLGINLTKRT CLTILKDISG
0201: IIQPSRMTLL LGPPSSGKTT LLLALAGKLD PTLKTRGEIS YNGYRLEEFV PQKTAAYISQ NDVHVGEMTV KETFDFSARC QGVGSRYDLL TELARREKEG
0301: GILPEAEVDL FMKATAIEGV KSSLQTDYTL RILGLDICAD TIVGDEMQRG ISGGQRKRVT TGEMIVGPTK VLFMDEISTG LDSSTTFQIV KCLQQIVHLG
0401: EATILMSLLQ PAPETFELFD DIILLSEGQI VYQGPREFVL EFFEACGFRC PERKGTADFL QEVTSRKDQE QYWADKERPY RYISVSEFAQ CFKRFHVGLR
0501: LENELSVPFD KSQSHKAALV FSKKSVSTSE LLKASFAKEW LLIKRNSFVY IFKTVQIVMV ALIASTVFLR TRMHTRNEDD GVIYIGALLF GLIVNVFNGF
0601: AELSIAISRL PVFYKHRDLL FYPAWIFTLP NFLLRIPISI LETVVWTVMT YYTIGYAPEA SRFFKQLVLV FLIQQMAAGL FRTVAGLCRS MIISNTGGAL
0701: SVLIIFVLGG FILPKDVIPK WWIWGFWISP LTYGYNALAV NEFLAPRWMN KPSSDDRPLG RAILENANVF PEARWYWIGA GALLGFSILF NLLFTFFLMY
0801: LNPIGKPQAV ISEEAAAEME ENRDETRESP RIRRAGSEND SLPRELSKRD GNNAREMMVL RMSPSGTNRL NRDMSIDEAT TGVAPKRGMV LPFTPLAMSF
0901: DEVSYYVDMP AEMKDQGVTE DRLQLLRNVT GAFRPGVLTA LMGVSGAGKT TLMDVLAGRK TGGYVEGDIR ISGYPKNQET FARISGYCEQ NDIHSPQVTV
1001: RESLIYSAFL RLPKEVSDGE KLKFVDEVME LVELDNLRDA IVGLPGITGL STEQRKRLTI AVELVANPSI IFMDEPTSGL DARAAAIVMR TVRNTVDTGR
1101: TVVCTIHQPS IDIFEAFDEL LLMKRGGQVI YSGPLGRNSH KIIEYFEAIP GVPKIKDKYN PATWMLEVSS VAAEVRLQMD FAEYYKSSAL YQRNKALVGE
1201: LSNPASGTND LYFPTQFSES SWGQFKACLW KQWWTYWRSP DYNLVRFFFT LVTALLLGSI FWRIGHKSGS ANNLRIVIGA MYAAVLFVGV NNCSTVQPLV
1301: AIERTVFYRE RAAGMYSALP YAMAQVLVEI PYVVIQAAYY SLIVYSMMSF QWTAAKFFWF YFISLFSFLY FTYYGMMTVS LSPNHQVAAI FASTFYSVFN
1401: LFSGFFIPRP RIPKWWVWYY WICPLQWTVY GLIVTQYGDL ESYITVPGSE TPIRTKDYVK DHFGYHTDFM PVVAIVLVGF ALFFAFMFAY CIKKLNFQQR

Best Arabidopsis Sequence Match ( AT1G59870.1 )
(BLAST)

0001: MDYNPNLPPL GGGGVSMRRS ISRSVSRASR NIEDIFSSGS RRTQSVNDDE EALKWAAIEK LPTYSRLRTT LMNAVVEDDV YGNQLMSKEV DVTKLDGEDR
0101: QKFIDMVFKV AEQDNERILT KLRNRIDRVG IKLPTVEVRY EHLTIKADCY TGNRSLPTLL NVVRNMGESA LGMIGIQFAK KAQLTILKDI SGVIKPGRMT
0201: LLLGPPSSGK TTLLLALAGK LDKSLQVSGD ITYNGYQLDE FVPRKTSAYI SQNDLHVGIM TVKETLDFSA RCQGVGTRYD LLNELARREK DAGIFPEADV
0301: DLFMKASAAQ GVKNSLVTDY TLKILGLDIC KDTIVGDDMM RGISGGQKKR VTTGEMIVGP TKTLFMDEIS TGLDSSTTFQ IVKCLQQIVH LNEATVLMSL
0401: LQPAPETFDL FDDIILVSEG QIVYQGPRDN ILEFFESFGF KCPERKGTAD FLQEVTSKKD QEQYWVNPNR PYHYIPVSEF ASRYKSFHVG TKMSNELAVP
0501: FDKSRGHKAA LVFDKYSVSK RELLKSCWDK EWLLMQRNAF FYVFKTVQIV IIAAITSTLF LRTEMNTRNE GDANLYIGAL LFGMIINMFN GFAEMAMMVS
0601: RLPVFYKQRD LLFYPSWTFS LPTFLLGIPS SILESTAWMV VTYYSIGFAP DASRFFKQFL LVFLIQQMAA SLFRLIASVC RTMMIANTGG ALTLLLVFLL
0701: GGFLLPKGKI PDWWGWAYWV SPLTYAFNGL VVNEMFAPRW MNKMASSNST IKLGTMVLNT WDVYHQKNWY WISVGALLCF TALFNILFTL ALTYLNPLGK
0801: KAGLLPEEEN EDADQGKDPM RRSLSTADGN RRGEVAMGRM SRDSAAEASG GAGNKKGMVL PFTPLAMSFD DVKYFVDMPG EMRDQGVTET RLQLLKGVTG
0901: AFRPGVLTAL MGVSGAGKTT LMDVLAGRKT GGYIEGDVRI SGFPKVQETF ARISGYCEQT DIHSPQVTVR ESLIFSAFLR LPKEVGKDEK MMFVDQVMEL
1001: VELDSLRDSI VGLPGVTGLS TEQRKRLTIA VELVANPSII FMDEPTSGLD ARAAAIVMRA VRNTVDTGRT VVCTIHQPSI DIFEAFDELM LMKRGGQVIY
1101: AGPLGQNSHK VVEYFESFPG VSKIPEKYNP ATWMLEASSL AAELKLSVDF AELYNQSALH QRNKALVKEL SVPPAGASDL YFATQFSQNT WGQFKSCLWK
1201: QWWTYWRSPD YNLVRFIFTL ATSLLIGTVF WQIGGNRSNA GDLTMVIGAL YAAIIFVGIN NCSTVQPMVA VERTVFYRER AAGMYSAMPY AISQVTCELP
1301: YVLIQTVYYS LIVYAMVGFE WKAEKFFWFV FVSYFSFLYW TYYGMMTVSL TPNQQVASIF ASAFYGIFNL FSGFFIPRPK IPKWWIWYYW ICPVAWTVYG
1401: LIVSQYGDVE TRIQVLGGAP DLTVKQYIED HYGFQSDFMG PVAAVLIAFT VFFAFIFAFC IRTLNFQTR

Arabidopsis Description

ABCG36ABC transporter G family member 36 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIE2]
SUBAcon: [plasma membrane,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.