CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plasma membrane
BaCelLo:	cytosol
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G271500.1	Wheat	cytosol	51.74	74.92
CDY69529	Canola	plasma membrane	58.27	72.55
CDX97743	Canola	plasma membrane	99.1	62.35
CDY20193	Canola	plasma membrane, plastid	87.18	55.92
AT3G16340.1	Thale cress	plasma membrane	87.96	55.23
Os06t0554800-01	Rice	plasma membrane	70.87	53.98
TraesCS7A01G356200.1	Wheat	plasma membrane	70.08	52.22
OQU76555	Sorghum	mitochondrion, plasma membrane	70.75	48.65
HORVU7Hr1G088630.1	Barley	vacuole	70.53	48.23
CDY63361	Canola	plasma membrane	21.26	47.49
CDX67921	Canola	plasma membrane, plastid	71.99	46.04
Bra027171.1-P	Field mustard	plasma membrane	98.76	45.68
Solyc03g120980.2.1	Tomato	plastid	73.9	43.8
CDY39621	Canola	plastid	70.3	43.52
PGSC0003DMT400006729	Potato	plastid	73.34	43.47
CDY36534	Canola	plastid	70.08	43.41
KRH23404	Soybean	plasma membrane	71.65	42.84
GSMUA_Achr9P16240_001	Banana	cytosol, mitochondrion, peroxisome, plasma membrane	71.99	42.67
CDX83991	Canola	plastid	70.3	42.57
CDY65557	Canola	plasma membrane	17.89	42.51
CDX79673	Canola	cytosol, peroxisome, plasma membrane	57.59	41.93
Zm00001d036986_P002	Maize	plasma membrane	70.53	41.58
Zm00001d046277_P002	Maize	cytosol, nucleus, plasma membrane	70.98	40.97
GSMUA_Achr11P...	Banana	plasma membrane	66.25	40.9
Zm00001d043598_P003	Maize	cytosol, nucleus, plasma membrane	66.14	39.52
EES01392	Sorghum	cytosol, peroxisome, plasma membrane	65.8	39.5
CDY36570	Canola	cytosol, nucleus, plasma membrane, plastid	58.04	36.52
CDY48188	Canola	cytosol, peroxisome, plasma membrane	58.27	36.48
CDY39660	Canola	cytosol, nucleus, plasma membrane	57.93	36.4
CDX77057	Canola	cytosol, peroxisome, plasma membrane	58.04	36.34
CDX83314	Canola	cytosol	56.81	35.54
CDY43723	Canola	cytosol, mitochondrion, peroxisome, plasma membrane	58.04	35.51
CDX95741	Canola	cytosol	56.13	35.12
CDY29713	Canola	cytosol, peroxisome, plasma membrane	56.24	34.99
CDX97864	Canola	cytosol, peroxisome, plasma membrane	56.13	34.92
CDY52757	Canola	cytosol, peroxisome, plasma membrane	51.63	31.85
CDY07588	Canola	cytosol, peroxisome, plasma membrane	51.52	31.78
CDX74974	Canola	cytosol	50.51	31.78
CDX91350	Canola	cytosol, peroxisome, plasma membrane	50.51	31.78
CDY18456	Canola	cytosol, nucleus, plasma membrane	50.17	31.72
CDX84561	Canola	cytosol, mitochondrion, peroxisome, plasma membrane	56.58	30.84
CDX85303	Canola	cytosol	47.81	30.34
CDY64951	Canola	cytosol, peroxisome, plasma membrane	46.68	30.07
CDY06512	Canola	cytosol, peroxisome, plasma membrane	45.22	29.24
CDX74973	Canola	cytosol	44.32	28.22
CDX91351	Canola	cytosol	37.35	26.86
CDY55440	Canola	cytosol, nucleus, plasma membrane	23.73	22.0
CDY68747	Canola	plastid	20.81	21.64
CDY69102	Canola	plastid	20.47	21.36
CDY65558	Canola	cytosol	21.37	20.28
CDY58247	Canola	cytosol	20.58	20.02
CDY70099	Canola	cytosol	0.34	0.7
CDY65389	Canola	cytosol	0.0	0.0
CDX71718	Canola	cytosol	0.0	0.0

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	GO:A0A078GY52	UniProt:A0A078GY52	InterPro:AAA+_ATPase	InterPro:ABCG_PDR_2
InterPro:ABC_2_trans	InterPro:ABC_transporter-like	EnsemblPlants:CDY30162	ProteinID:CDY30162	ProteinID:CDY30162.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	EnsemblPlantsGene:GSBRNA2T00044742001	InterPro:IPR003439	InterPro:P-loop_NTPase
InterPro:PDR_assoc	PFAM:PF00005	PFAM:PF01061	PFAM:PF08370	PFscan:PS50893	PANTHER:PTHR19241
PANTHER:PTHR19241:SF437	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0004EEDC51	SEG:seg

Description

BnaC05g37000DBnaC05g37000D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GY52]

Coordinates

chrLK032249:+:432021..436247

Molecular Weight (calculated)

101057.0 Da

IEP (calculated)

7.744

GRAVY (calculated)

0.241

Length

889 amino acids

Sequence
(BLAST)

001: MALIASTVYL RTGMGTKDEN DGAVYIGALM FSMIANMFNG FAELSLMIQR LPVFYKQRDL LFHPSWTFTL PTFLLSIPIS IFESVVWVSI TYYLIGFSPE
101: PSRFFKHLLV IFLTQQMAGS IFRFIATTCR SMILANTGGS LVVLLLFLLG GFIVPRGEIP TWWQWAYWVS PMTYTYDALT VNEMLAPRWM DQQSSDNSTR
201: LGLAVLEIFD VFTDPSWYWI GVGAVLGFTI LFNILATLAL AYLNPLEKPQ AIVSKEGAEE NIVTNGSEGK NTYVKRGMVL PFTPYTMSFD KVNYYVDMPK
301: EMREQEVATD KLQLLREVTG VFRPGVLTAL MGVSGAGKTT LMDVLAGRKT GGYIEGDIRI SGFPKRQETF ARVSGYCEQN DIHSPQVTVR ESLIYSAFLR
401: LPKEVTKDEK MRFVDQVMEL VELKSLKDGI VGLPGISGLS TEQRKRLTIA VELVANPSII FMDEPTSGLD ARAAAIVMRT VRNTVDTGRT VVCTIHQPSI
501: DIFEAFDELL LMKRGGQVIY AGPLGQNFHK IIEYFQAIPG VQKIKEKYNP ATWMLEVSSV AAEAKLDIDF AEHYITSSLY QRNKKLVKKV STPPQGAKDL
601: YFSTQFSESF LGQFKSCLWK QWITYWRTPD YNLARFFFTF FAALMVGSIF WKVGTTRDSA NDLTKVIGAM YAAVLFVGIN NATSVQPLVA VERTVFYRER
701: AAEMYSALPY ALAQVVCEIP FVLIQTTYYT LITYAMMCFE WTVVKFFWFF FVSFFSFLYF TYYGMMAVAI TPNQQVAAIF AGAFYGLFNL FSGFLIPRPR
801: IPKWWIWYYW ICPVAWTVYG LIVSQYGDQE DTIKVPGMME DPTIKWYIEN HYGYDPNFMG SIAAVLVGFT VFFAFMFAFG IKMLNFQQR

Best Arabidopsis Sequence Match ( AT1G15210.1 )
(BLAST)

0001: MDYDPAHAMS RGGSMRQTIS RSVSKASRNM EDIFNTSSRR TKSVNEDEEA LKWASIEKLP TYNRLRTSLM PELGEDDVYG NQILNKAVDV TKLDGEERQK
0101: FIDMVFKVAE QDNERILTKL RNRIDRVGIQ LPTVEVRYDH LTVKADCYTG DRSLPSLLNA VRNMGEAALG MIGIRLAKKA QLTILKDVSG IVKPSRMTLL
0201: LGPPSSGKTT LLLALAGKLD KSLDVSGEVT YNGYRLNEFV PIKTSAYISQ NDLHVGIMTV KETLDFSARC QGVGTRYDLL NELARREKDA GIFPEADVDL
0301: FMKASAAQGV KSSLITDYTL KILGLDICKD TIVGDDMMRG ISGGQKKRVT TGEMIVGPTK TLFMDEISTG LDSSTTFQIV KCLQQIVHLT EATVLISLLQ
0401: PAPETFDLFD DIILLSEGQI VYQGPRDHIL EFFESFGFKC PERKGTADFL QEVTSKKDQE QYWVDPNRPY RYIPVSEFAS SFKKFHVGSK LSNELSVPYD
0501: KSKSHKAALM FDKYSIKKTE LLKSCWDKEW MLMKRNSFFY VFKTVQIIII AAITSTLYLR TEMHTRNEID ANIYVGSLLF AMIVNMFNGL AEMAMTIQRL
0601: PVFYKQRDLL FHPPWTYTLP TFLLGIPISI FESTAWMVVT YYSIGYAPDA ERFFKQFLII FLIQQMAAGI FRFIASTCRT MTIANTGGVL VLLVVFLTGG
0701: FLLPRSEIPV WWRWAYWISP LSYAFNAITV NELFAPRWMN KMSGNSTTRL GTSVLNIWDV FDDKNWYWIG VGGLLGFTVI FNGFFTLALT YLDPLGKAQA
0801: ILPKEEDEEA KGKAGSNKET EMESVSAKKG MVLPFTPLAM SFDDVKYFVD MPAEMREQGV QETRLQLLKG VTSAFRPGVL TALMGVSGAG KTTLMDVLAG
0901: RKTGGYIEGD VRVSGFPKKQ ETFARISGYC EQTDIHSPQV TVRESLIFSA FLRLAKEVSK EDKLMFVDQV MELVELVDLR DAIVGLPGVT GLSTEQRKRL
1001: TIAVELVANP SIIFMDEPTS GLDARAAAIV MRAVRNTVDT GRTVVCTIHQ PSIDIFEAFD ELLLMKRGGH VIYSGPLGRN SHKVVEYFES FPGVPKIPEK
1101: YNPATWMLEA SSLAAELKLG VDFAELYKAS ALCQRNKALV QELSVPPQGA TDLYFATQFS QNTWGQFKSC LWKQWWTYWR SPDYNLVRFI FTLATSLMIG
1201: SVFWQIGGKR SNVQDLTMVI GAIYAAVVFV GINNCSTVQP MVAVERTVFY REKAAGMYSA IPYAISQVTC ELPYVLIQTT YYSLIIYSMV GFEWKASKFL
1301: WFIFINYFSF LYWTYYGMMT VSLTPNQQVA SIFASAFYGI FNLFSGFFIP RPKIPKWWVW YYWICPVAWT IYGLITSQYG DVETPIALLG GAPGLTVKQY
1401: IKDQYGFESD YMGPVAGVLV GFTVFFAFIF AFCIKTLNFQ SR

Arabidopsis Description

ABCG35PDR7 [Source:UniProtKB/TrEMBL;Acc:A0A178WAD4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.