Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY48188 | Canola | cytosol, peroxisome, plasma membrane | 99.23 | 99.23 |
| AT2G26910.1 | Thale cress | cytosol, peroxisome, plasma membrane | 93.1 | 93.1 |
| Solyc05g018510.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 74.44 | 74.38 |
| EES00201 | Sorghum | plasma membrane | 72.32 | 72.02 |
| HORVU3Hr1G022800.1 | Barley | plasma membrane | 72.32 | 71.77 |
| TraesCS3B01G141700.2 | Wheat | golgi, unclear | 72.04 | 71.49 |
| Os01t0177900-01 | Rice | plasma membrane | 71.55 | 71.25 |
| TraesCS3A01G122500.2 | Wheat | plasma membrane | 71.76 | 71.21 |
| TraesCS3D01G124400.2 | Wheat | plasma membrane | 71.9 | 69.65 |
| PGSC0003DMT400067210 | Potato | plasma membrane | 68.45 | 69.08 |
| Zm00001d039631_P002 | Maize | plasma membrane | 69.3 | 65.86 |
| GSMUA_Achr7P08510_001 | Banana | plasma membrane | 71.62 | 64.04 |
| CDY65389 | Canola | cytosol | 3.45 | 61.25 |
| CDY69529 | Canola | plasma membrane | 29.44 | 58.54 |
| CDY30162 | Canola | plasma membrane | 36.34 | 58.04 |
| CDX79673 | Canola | cytosol, peroxisome, plasma membrane | 49.86 | 57.99 |
| CDY36570 | Canola | cytosol, nucleus, plasma membrane, plastid | 57.04 | 57.32 |
| CDY39660 | Canola | cytosol, nucleus, plasma membrane | 57.11 | 57.31 |
| CDX67921 | Canola | plasma membrane, plastid | 54.3 | 55.47 |
| CDX97743 | Canola | plasma membrane | 54.58 | 54.85 |
| CDY43723 | Canola | cytosol, mitochondrion, peroxisome, plasma membrane | 55.77 | 54.51 |
| CDY20193 | Canola | plasma membrane, plastid | 52.61 | 53.9 |
| CDY39621 | Canola | plastid | 53.66 | 53.06 |
| CDY36534 | Canola | plastid | 53.52 | 52.96 |
| CDX83991 | Canola | plastid | 53.45 | 51.7 |
| CDX95741 | Canola | cytosol | 50.7 | 50.67 |
| CDX83314 | Canola | cytosol | 50.49 | 50.46 |
| CDY70099 | Canola | cytosol | 15.21 | 50.23 |
| CDX97864 | Canola | cytosol, peroxisome, plasma membrane | 50.14 | 49.83 |
| CDY29713 | Canola | cytosol, peroxisome, plasma membrane | 50.07 | 49.76 |
| CDY64951 | Canola | cytosol, peroxisome, plasma membrane | 48.31 | 49.71 |
| CDX85303 | Canola | cytosol | 48.87 | 49.54 |
| CDX74974 | Canola | cytosol | 48.03 | 48.27 |
| CDX91350 | Canola | cytosol, peroxisome, plasma membrane | 47.82 | 48.05 |
| CDY18456 | Canola | cytosol, nucleus, plasma membrane | 47.46 | 47.94 |
| CDX84561 | Canola | cytosol, mitochondrion, peroxisome, plasma membrane | 55.0 | 47.88 |
| CDY68747 | Canola | plastid | 28.66 | 47.6 |
| CDY69102 | Canola | plastid | 28.38 | 47.3 |
| CDY07588 | Canola | cytosol, peroxisome, plasma membrane | 47.54 | 46.84 |
| CDY52757 | Canola | cytosol, peroxisome, plasma membrane | 47.32 | 46.63 |
| CDX71718 | Canola | cytosol | 1.83 | 46.43 |
| CDY63361 | Canola | plasma membrane | 12.89 | 45.98 |
| CDY55440 | Canola | cytosol, nucleus, plasma membrane | 30.99 | 45.88 |
| CDX91351 | Canola | cytosol | 39.15 | 44.98 |
| CDY06512 | Canola | cytosol, peroxisome, plasma membrane | 43.52 | 44.95 |
| CDY58247 | Canola | cytosol | 28.73 | 44.64 |
| CDX74973 | Canola | cytosol | 43.66 | 44.41 |
| CDY65558 | Canola | cytosol | 29.08 | 44.08 |
| CDY65557 | Canola | plasma membrane | 11.06 | 41.98 |
Protein Annotations
| MapMan:21.9.4.3 | MapMan:24.1.3.2.2 | Gene3D:3.40.50.300 | GO:A0A078CK19 | InterPro:AAA+_ATPase | InterPro:ABCG_PDR_1 |
| InterPro:ABCG_PDR_2 | InterPro:ABC_2_trans | InterPro:ABC_trans_N | InterPro:ABC_transporter-like | EnsemblPlants:CDX77057 | ProteinID:CDX77057 |
| ProteinID:CDX77057.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | EnsemblPlantsGene:GSBRNA2T00127630001 |
| InterPro:IPR003439 | InterPro:P-loop_NTPase | InterPro:PDR_assoc | PFAM:PF00005 | PFAM:PF01061 | PFAM:PF08370 |
| PFAM:PF14510 | PFscan:PS50893 | PANTHER:PTHR19241 | PANTHER:PTHR19241:SF280 | SMART:SM00382 | SUPFAM:SSF52540 |
| TMHMM:TMhelix | UniParc:UPI0004EB262A | SEG:seg | : | : | : |
Description
BnaC04g38520D
Coordinates
chrLK031809:+:794619..801349
Molecular Weight (calculated)
161685.0 Da
IEP (calculated)
8.572
GRAVY (calculated)
0.049
Length
1420 amino acids
Sequence
(BLAST)
(BLAST)
0001: MWNSTENAFS RSSSLKDEVE EEEELRWVAL QRLPTYSRIR RGIFRDDIGE HKEISIGNLE ASEQRILLDR LVNSVDHDPQ LFFARVRKRF DAVDLKFPKI
0101: EVRFQNLMVE SFVHVGSRAL PTIPNFIINM AEAFLRNIRL YGGKRSKLTI LDNVSGIIRP SRLTLLLGPP SSGKTTLLLS LAGRLGNTLQ TSGKITYNGY
0201: NLKEIVAPRT SAYVSQQDWH VAEMTVRQNL EFAGRCQGVG FKYDMLVELA RREKLAGIVA DEDLDIFMKS LALGGQETSL VVEYIMKILG LDTCADTLVG
0301: DEMIKGISGG QKKRLTTGEL LVGPARVLFM DEISNGLDSS TTHQIIMYMR HSTHALEGTT VISLLQPSPE TYELFDDVIL MSEGQIIYQG PRDEVLDFFS
0401: SLGFSCPERK NVADFLQEVT SKKDQQQYWS VPFRPYRYVP PGKFAEAFRS FPTGKKLAKK LDVPFDKRFN HSAALSTSQY GVKRSDLLKI NFSWQKQLMK
0501: QNAFIYVFKF VQLLLVALIT MTVFCRTTMH HNTIDDGNIY LGSLYFSMVI ILFNGFTEVP MLVAKLPVLY KHRDLHFYPS WAYTLPSWLL SIPTSIIESA
0601: TWVAVTYYTI GYDPHFSRFL QQFLLYFLLH QMSLSLFRVM GSLGRHMIVA NTFGSFAMLV VMTLGGFIIS RDSIPTWWIW GYWISPLMYA QNAASVNEFL
0701: SPSWQKRAGN HTSDSLGVAL LRERSLFTEN YWYWIGVGAL LGYTIIFNLL FTVFLAYLNP LGKLQAVVSR EELDDRDRKR KGDEFVVELR EYLQHSGSLH
0801: GKYFKNRGMV LPFQPLSLSF SNINYYVDVP LGLKEQGIQE DRLQLLVNIT GAFKPGVLTA LVGVSGAGKT TLMDVLAGRK TGGTIEGDVY ISGFPKRQET
0901: FARISGYCEQ NDVHSPCLTV FESLLFSACL RLPSDIDSET QKAFVHEVME LVELTSLSGA LVGLPGVDGL STEQRKRLTI AVELVANPSI VFMDEPTSGL
1001: DARAAAIVMR TVRNIVNTGR TIVCTIHQPS IDIFESFDEL LFMKRGGELI YAGPLGQRSC DLIKYFECIE GVKKIKAGHN PAAWMLDVTS STEEQRLGLD
1101: FAEIYKNSNL CRRNKELVEG LSKPSNISKK LEFPTRYSQS FYSQFVACLW KQNLSYWRNP QYTAVRFFYT VVISLMLGTI CWKFGSKRDT QQELFNSMGS
1201: MYAAVLFIGI TNATAAQPVV SIERFVSYRE RAAGMYSALP FAFAQVFIEF PYVLAQSTIY SSIFYAMASF EWSAVKFLWY LFFMYFSIMY FTFYGMMTTA
1301: ITPNHNVASI IAAPFYMLWN LFSGFMIPYK RIPLWWRWYY WANPVAWTLY GLLVSQYGDD EREVKLSDGV HKVMVKQLLE EVMGYKHDFL GVSAIMVVAF
1401: CLFFSVVFAF SIKTFNFQRR
0101: EVRFQNLMVE SFVHVGSRAL PTIPNFIINM AEAFLRNIRL YGGKRSKLTI LDNVSGIIRP SRLTLLLGPP SSGKTTLLLS LAGRLGNTLQ TSGKITYNGY
0201: NLKEIVAPRT SAYVSQQDWH VAEMTVRQNL EFAGRCQGVG FKYDMLVELA RREKLAGIVA DEDLDIFMKS LALGGQETSL VVEYIMKILG LDTCADTLVG
0301: DEMIKGISGG QKKRLTTGEL LVGPARVLFM DEISNGLDSS TTHQIIMYMR HSTHALEGTT VISLLQPSPE TYELFDDVIL MSEGQIIYQG PRDEVLDFFS
0401: SLGFSCPERK NVADFLQEVT SKKDQQQYWS VPFRPYRYVP PGKFAEAFRS FPTGKKLAKK LDVPFDKRFN HSAALSTSQY GVKRSDLLKI NFSWQKQLMK
0501: QNAFIYVFKF VQLLLVALIT MTVFCRTTMH HNTIDDGNIY LGSLYFSMVI ILFNGFTEVP MLVAKLPVLY KHRDLHFYPS WAYTLPSWLL SIPTSIIESA
0601: TWVAVTYYTI GYDPHFSRFL QQFLLYFLLH QMSLSLFRVM GSLGRHMIVA NTFGSFAMLV VMTLGGFIIS RDSIPTWWIW GYWISPLMYA QNAASVNEFL
0701: SPSWQKRAGN HTSDSLGVAL LRERSLFTEN YWYWIGVGAL LGYTIIFNLL FTVFLAYLNP LGKLQAVVSR EELDDRDRKR KGDEFVVELR EYLQHSGSLH
0801: GKYFKNRGMV LPFQPLSLSF SNINYYVDVP LGLKEQGIQE DRLQLLVNIT GAFKPGVLTA LVGVSGAGKT TLMDVLAGRK TGGTIEGDVY ISGFPKRQET
0901: FARISGYCEQ NDVHSPCLTV FESLLFSACL RLPSDIDSET QKAFVHEVME LVELTSLSGA LVGLPGVDGL STEQRKRLTI AVELVANPSI VFMDEPTSGL
1001: DARAAAIVMR TVRNIVNTGR TIVCTIHQPS IDIFESFDEL LFMKRGGELI YAGPLGQRSC DLIKYFECIE GVKKIKAGHN PAAWMLDVTS STEEQRLGLD
1101: FAEIYKNSNL CRRNKELVEG LSKPSNISKK LEFPTRYSQS FYSQFVACLW KQNLSYWRNP QYTAVRFFYT VVISLMLGTI CWKFGSKRDT QQELFNSMGS
1201: MYAAVLFIGI TNATAAQPVV SIERFVSYRE RAAGMYSALP FAFAQVFIEF PYVLAQSTIY SSIFYAMASF EWSAVKFLWY LFFMYFSIMY FTFYGMMTTA
1301: ITPNHNVASI IAAPFYMLWN LFSGFMIPYK RIPLWWRWYY WANPVAWTLY GLLVSQYGDD EREVKLSDGV HKVMVKQLLE EVMGYKHDFL GVSAIMVVAF
1401: CLFFSVVFAF SIKTFNFQRR
0001: MWNSAENAFS RSTSFKDEIE DEEELRWAAL QRLPTYSRIR RGIFRDMVGE PKEIQIGNLE ASEQRLLLDR LVNSVENDPE QFFARVRKRF DAVDLKFPKI
0101: EVRFQNLMVE SFVHVGSRAL PTIPNFIINM AEGLLRNIHV IGGKRNKLTI LDGISGVIRP SRLTLLLGPP SSGKTTLLLA LAGRLGTNLQ TSGKITYNGY
0201: DLKEIIAPRT SAYVSQQDWH VAEMTVRQTL EFAGRCQGVG FKYDMLLELA RREKLAGIVP DEDLDIFMKS LALGGMETSL VVEYVMKILG LDTCADTLVG
0301: DEMIKGISGG QKKRLTTGEL LVGPARVLFM DEISNGLDSS TTHQIIMYMR HSTHALEGTT VISLLQPSPE TYELFDDVIL MSEGQIIYQG PRDEVLDFFS
0401: SLGFTCPDRK NVADFLQEVT SKKDQQQYWS VPFRPYRYVP PGKFAEAFRS YPTGKKLAKK LEVPFDKRFN HSAALSTSQY GVKKSELLKI NFAWQKQLMK
0501: QNAFIYVFKF VQLLLVALIT MTVFCRTTMH HNTIDDGNIY LGSLYFSMVI ILFNGFTEVP MLVAKLPVLY KHRDLHFYPS WAYTLPSWLL SIPTSIIESA
0601: TWVAVTYYTI GYDPLFSRFL QQFLLYFSLH QMSLGLFRVM GSLGRHMIVA NTFGSFAMLV VMTLGGFIIS RDSIPSWWIW GYWISPLMYA QNAASVNEFL
0701: GHNWQKTAGN HTSDSLGLAL LKERSLFSGN YWYWIGVAAL LGYTVLFNIL FTLFLAHLNP WGKFQAVVSR EELDEREKKR KGDEFVVELR EYLQHSGSIH
0801: GKYFKNRGMV LPFQPLSLSF SNINYYVDVP LGLKEQGILE DRLQLLVNIT GAFRPGVLTA LVGVSGAGKT TLMDVLAGRK TGGTIEGDVY ISGFPKRQET
0901: FARISGYCEQ NDVHSPCLTV VESLLFSACL RLPADIDSET QRAFVHEVME LVELTSLSGA LVGLPGVDGL STEQRKRLTI AVELVANPSI VFMDEPTSGL
1001: DARAAAIVMR TVRNIVNTGR TIVCTIHQPS IDIFESFDEL LFMKRGGELI YAGPLGQKSC ELIKYFESIE GVQKIKPGHN PAAWMLDVTA STEEHRLGVD
1101: FAEIYRNSNL CQRNKELIEV LSKPSNIAKE IEFPTRYSQS LYSQFVACLW KQNLSYWRNP QYTAVRFFYT VVISLMLGTI CWKFGSKRDT QQQLFNAMGS
1201: MYAAVLFIGI TNATAAQPVV SIERFVSYRE RAAGMYSALP FAFAQVFIEF PYVLAQSTIY STIFYAMAAF EWSAVKFLWY LFFMYFSIMY FTFYGMMTTA
1301: ITPNHNVASI IAAPFYMLWN LFSGFMIPYK RIPLWWRWYY WANPVAWTLY GLLVSQYGDD ERSVKLSDGI HQVMVKQLLE DVMGYKHDFL GVSAIMVVAF
1401: CVFFSLVFAF AIKAFNFQRR
0101: EVRFQNLMVE SFVHVGSRAL PTIPNFIINM AEGLLRNIHV IGGKRNKLTI LDGISGVIRP SRLTLLLGPP SSGKTTLLLA LAGRLGTNLQ TSGKITYNGY
0201: DLKEIIAPRT SAYVSQQDWH VAEMTVRQTL EFAGRCQGVG FKYDMLLELA RREKLAGIVP DEDLDIFMKS LALGGMETSL VVEYVMKILG LDTCADTLVG
0301: DEMIKGISGG QKKRLTTGEL LVGPARVLFM DEISNGLDSS TTHQIIMYMR HSTHALEGTT VISLLQPSPE TYELFDDVIL MSEGQIIYQG PRDEVLDFFS
0401: SLGFTCPDRK NVADFLQEVT SKKDQQQYWS VPFRPYRYVP PGKFAEAFRS YPTGKKLAKK LEVPFDKRFN HSAALSTSQY GVKKSELLKI NFAWQKQLMK
0501: QNAFIYVFKF VQLLLVALIT MTVFCRTTMH HNTIDDGNIY LGSLYFSMVI ILFNGFTEVP MLVAKLPVLY KHRDLHFYPS WAYTLPSWLL SIPTSIIESA
0601: TWVAVTYYTI GYDPLFSRFL QQFLLYFSLH QMSLGLFRVM GSLGRHMIVA NTFGSFAMLV VMTLGGFIIS RDSIPSWWIW GYWISPLMYA QNAASVNEFL
0701: GHNWQKTAGN HTSDSLGLAL LKERSLFSGN YWYWIGVAAL LGYTVLFNIL FTLFLAHLNP WGKFQAVVSR EELDEREKKR KGDEFVVELR EYLQHSGSIH
0801: GKYFKNRGMV LPFQPLSLSF SNINYYVDVP LGLKEQGILE DRLQLLVNIT GAFRPGVLTA LVGVSGAGKT TLMDVLAGRK TGGTIEGDVY ISGFPKRQET
0901: FARISGYCEQ NDVHSPCLTV VESLLFSACL RLPADIDSET QRAFVHEVME LVELTSLSGA LVGLPGVDGL STEQRKRLTI AVELVANPSI VFMDEPTSGL
1001: DARAAAIVMR TVRNIVNTGR TIVCTIHQPS IDIFESFDEL LFMKRGGELI YAGPLGQKSC ELIKYFESIE GVQKIKPGHN PAAWMLDVTA STEEHRLGVD
1101: FAEIYRNSNL CQRNKELIEV LSKPSNIAKE IEFPTRYSQS LYSQFVACLW KQNLSYWRNP QYTAVRFFYT VVISLMLGTI CWKFGSKRDT QQQLFNAMGS
1201: MYAAVLFIGI TNATAAQPVV SIERFVSYRE RAAGMYSALP FAFAQVFIEF PYVLAQSTIY STIFYAMAAF EWSAVKFLWY LFFMYFSIMY FTFYGMMTTA
1301: ITPNHNVASI IAAPFYMLWN LFSGFMIPYK RIPLWWRWYY WANPVAWTLY GLLVSQYGDD ERSVKLSDGI HQVMVKQLLE DVMGYKHDFL GVSAIMVVAF
1401: CVFFSLVFAF AIKAFNFQRR
Arabidopsis Description
ABCG32PEC1 [Source:UniProtKB/TrEMBL;Acc:A0A178VNA5]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.