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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:
  • plastid 1
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, plasma membrane
Any Predictor:cytosol, nucleus, plastid
BaCelLo:plastid
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY36570 Canola cytosol, nucleus, plasma membrane, plastid 99.08 99.22
AT1G15520.1 Thale cress plastid 94.63 94.1
GSMUA_Achr1P14530_001 Banana mitochondrion, plasma membrane 59.43 73.71
VIT_09s0002g05370.t01 Wine grape mitochondrion, plasma membrane 73.0 72.7
VIT_09s0002g05560.t01 Wine grape plasma membrane 73.22 71.25
Solyc09g091660.2.1 Tomato plastid 71.87 70.62
PGSC0003DMT400076208 Potato plastid 71.66 70.42
GSMUA_Achr9P02950_001 Banana plasma membrane 69.12 70.41
PGSC0003DMT400034130 Potato cytosol, mitochondrion, peroxisome, plasma membrane, plastid 61.77 70.2
PGSC0003DMT400076209 Potato plasma membrane 70.88 69.99
PGSC0003DMT400061280 Potato cytosol, nucleus, plasma membrane, plastid 70.81 69.83
Os01t0609300-01 Rice plasma membrane 63.75 69.76
Solyc12g098210.1.1 Tomato plastid 69.96 69.47
Solyc05g053590.2.1 Tomato cytosol, mitochondrion, peroxisome, plasma membrane 69.19 69.33
Solyc12g100180.1.1 Tomato mitochondrion, nucleus, plasma membrane, plastid 70.18 69.2
KRH67471 Soybean endoplasmic reticulum 70.39 68.93
GSMUA_Achr6P34530_001 Banana plasma membrane 64.24 68.92
Os08t0384500-01 Rice plasma membrane 36.54 67.76
EES03260 Sorghum plasma membrane 61.13 67.58
TraesCS3D01G234400.1 Wheat plasma membrane 69.12 67.26
KXG32863 Sorghum cytosol, peroxisome, plasma membrane 68.9 67.19
TraesCS3B01G248400.1 Wheat cytosol, peroxisome, plasma membrane 69.05 67.19
Zm00001d011315_P002 Maize plasma membrane 68.55 67.17
TraesCS3A01G217900.1 Wheat cytosol 68.9 67.06
HORVU3Hr1G053350.8 Barley vacuole 69.05 67.06
Os01t0342750-01 Rice plasma membrane 33.0 66.62
Os01t0609900-02 Rice plasma membrane 65.23 66.5
KXG32865 Sorghum plasma membrane 68.41 66.39
Os01t0609200-00 Rice plasma membrane 68.55 66.26
TraesCS3A01G218000.1 Wheat cytosol, mitochondrion, peroxisome, plasma membrane 67.7 66.11
TraesCS3D01G234300.2 Wheat cytosol, mitochondrion, peroxisome, plasma membrane 67.7 66.11
KRG95762 Soybean mitochondrion 66.71 66.01
TraesCS3B01G248500.1 Wheat cytosol, mitochondrion, peroxisome, plasma membrane 67.56 65.98
TraesCS7B01G292700.1 Wheat plasma membrane 66.36 65.66
HORVU7Hr1G092510.2 Barley plasma membrane 66.86 65.65
TraesCS2A01G483300.1 Wheat cytosol, mitochondrion, peroxisome, plasma membrane 67.21 65.63
EES03255 Sorghum cytosol, peroxisome, plasma membrane, plastid 67.84 65.62
TraesCS3A01G272800.2 Wheat cytosol, mitochondrion, nucleus, plasma membrane 66.71 65.56
Zm00001d044443_P001 Maize cytosol, mitochondrion, nucleus, plasma membrane 67.07 65.54
HORVU3Hr1G071470.1 Barley cytosol, mitochondrion, nucleus, plasma membrane 66.64 65.49
TraesCS3D01G272200.2 Wheat cytosol, mitochondrion, nucleus, plasma membrane 66.57 65.42
TraesCS7D01G386600.1 Wheat plasma membrane 66.78 65.4
TraesCS7A01G391100.1 Wheat plasma membrane 66.64 65.35
Zm00001d011319_P003 Maize cytosol, mitochondrion, peroxisome, plasma membrane 67.56 65.35
HORVU7Hr1G092380.8 Barley cytosol 66.78 65.31
TraesCS7A01G391000.1 Wheat plasma membrane 66.71 65.01
Os01t0609000-00 Rice plasma membrane 67.42 64.99
TraesCS7D01G386500.1 Wheat plasma membrane 66.64 64.94
TraesCSU01G097600.2 Wheat plasma membrane 66.64 64.94
HORVU3Hr1G053380.1 Barley cytosol, mitochondrion, peroxisome, plasma membrane 67.63 64.88
GSMUA_Achr9P01490_001 Banana plasma membrane 68.2 64.64
EER98908 Sorghum cytosol, nucleus, plasma membrane 66.5 64.41
TraesCS3B01G523700.1 Wheat mitochondrion 48.41 64.02
KXG32860 Sorghum plasma membrane 65.87 63.7
TraesCS3B01G306400.2 Wheat cytosol, mitochondrion, nucleus, plasma membrane 66.36 63.62
CDY69529 Canola plasma membrane 31.66 62.75
TraesCS5D01G190600.1 Wheat cytosol, nucleus, plasma membrane 64.17 62.71
TraesCS5B01G183500.1 Wheat cytosol, nucleus, plasma membrane 64.03 62.57
CDY65389 Canola cytosol 3.53 62.5
HORVU5Hr1G056280.6 Barley cytosol, nucleus, plasma membrane 63.96 62.41
TraesCS2B01G149900.1 Wheat cytosol, peroxisome, plasma membrane 54.7 62.32
TraesCS3B01G524400.1 Wheat cytosol, peroxisome, plasma membrane 63.25 62.24
EER98758 Sorghum cytosol, nucleus, plasma membrane 63.6 62.11
TraesCS3D01G474700.1 Wheat cytosol, nucleus, plasma membrane 63.32 62.01
TraesCS3A01G479800.1 Wheat cytosol, nucleus, plasma membrane 63.25 61.94
HORVU3Hr1G105140.4 Barley cytosol, peroxisome, plasma membrane 63.11 61.76
Zm00001d044442_P036 Maize plasma membrane 68.69 61.75
TraesCS5A01G185500.1 Wheat cytosol, nucleus, plasma membrane 60.92 61.75
TraesCS2D01G130000.1 Wheat cytosol, peroxisome, plasma membrane 61.63 60.94
KXG20401 Sorghum plasma membrane 62.26 60.76
Os09t0333000-00 Rice plasma membrane 34.56 60.22
CDX79673 Canola cytosol, peroxisome, plasma membrane 51.94 60.2
KRG95752 Soybean cytosol, peroxisome, plasma membrane 67.63 59.4
CDX67921 Canola plasma membrane, plastid 58.23 59.28
CDY70099 Canola cytosol 17.95 59.07
CDY39621 Canola plastid 59.65 58.77
PGSC0003DMT400043433 Potato endoplasmic reticulum, plasma membrane 6.29 58.55
CDY36534 Canola plastid 59.29 58.47
CDY30162 Canola plasma membrane 36.4 57.93
Os09t0332300-00 Rice plasma membrane 33.64 57.63
CDX97743 Canola plasma membrane 57.46 57.54
CDY43723 Canola cytosol, mitochondrion, peroxisome, plasma membrane 59.08 57.54
CDX77057 Canola cytosol, peroxisome, plasma membrane 57.31 57.11
CDY48188 Canola cytosol, peroxisome, plasma membrane 57.31 57.11
TraesCS6A01G107100.1 Wheat mitochondrion, plasma membrane 50.6 56.92
CDY20193 Canola plasma membrane, plastid 55.62 56.78
TraesCS6D01G094800.1 Wheat plasma membrane 37.1 56.7
CDX83991 Canola plastid 58.66 56.54
TraesCS2A01G127800.1 Wheat cytosol, peroxisome, plasma membrane 30.95 55.65
CDX97864 Canola cytosol, peroxisome, plasma membrane 55.34 54.79
CDY64951 Canola cytosol, peroxisome, plasma membrane 53.36 54.71
CDY29713 Canola cytosol, peroxisome, plasma membrane 55.12 54.58
CDX95741 Canola cytosol 54.7 54.47
CDX83314 Canola cytosol 54.63 54.4
CDX85303 Canola cytosol 53.78 54.32
Os01t0516900-00 Rice plasma membrane 26.22 52.85
CDX71718 Canola cytosol 2.05 51.79
CDY68747 Canola plastid 30.81 50.99
CDY69102 Canola plastid 30.67 50.94
CDX84561 Canola cytosol, mitochondrion, peroxisome, plasma membrane 58.23 50.52
CDY18456 Canola cytosol, nucleus, plasma membrane 49.96 50.28
CDX74974 Canola cytosol 50.11 50.18
CDX91350 Canola cytosol, peroxisome, plasma membrane 49.96 50.04
CDY07588 Canola cytosol, peroxisome, plasma membrane 50.95 50.03
CDY52757 Canola cytosol, peroxisome, plasma membrane 50.81 49.9
CDY55440 Canola cytosol, nucleus, plasma membrane 33.57 49.53
CDY63361 Canola plasma membrane 13.57 48.24
CDY06512 Canola cytosol, peroxisome, plasma membrane 46.57 47.93
CDY58247 Canola cytosol 30.95 47.92
CDX91351 Canola cytosol 41.27 47.25
CDY65558 Canola cytosol 31.02 46.85
CDX74973 Canola cytosol 46.15 46.78
CDY65557 Canola plasma membrane 11.52 43.58
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300GO:A0A078HMC6UniProt:A0A078HMC6InterPro:AAA+_ATPaseInterPro:ABCG_PDR_2
InterPro:ABC_2_transInterPro:ABC_trans_NInterPro:ABC_transporter-likeEnsemblPlants:CDY39660ProteinID:CDY39660ProteinID:CDY39660.1
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887EnsemblPlantsGene:GSBRNA2T00068232001InterPro:IPR003439
InterPro:P-loop_NTPaseInterPro:PDR_assocPFAM:PF00005PFAM:PF01061PFAM:PF08370PFAM:PF14510
PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF444SMART:SM00382SUPFAM:SSF52540TMHMM:TMhelix
UniParc:UPI0004EF2DBCSEG:seg::::
Description
BnaC05g11890DBnaC05g11890D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HMC6]
Coordinates
chrLK032453:-:286462..292402
Molecular Weight (calculated)
159861.0 Da
IEP (calculated)
7.262
GRAVY (calculated)
0.027
Length
1415 amino acids
Sequence
(BLAST)
0001: MEGTSFQKAS NSLRRDSSGW KRDSGMEIFS RSSREEDDEE ALKWAALEKL PTFDRLRKGI LTASHGINQI DIEKLGFQDT KKLLERLIKV GDDEHEKLLW
0101: KLKNRIDRVG IDLPTIEVRF DHLKVEAEVH VGGRALPTFV NFISNFADKL LNSLHLLPNR KKKFTILNDV SGIVKPGRMA LLLGPPSSGK TTLLLALAGK
0201: LDHELKETGR VTYNGHGMNE FVPQRAAAYI GQNDVHIGEM TVRETFAYAA RFQGVGSRYD MLTELARREK EANIKPDPDI DVFMKATSTT GEETNVMTDY
0301: ILKILGLEVC ADTMVGDDML RGISGGQKKR VTTGEMLVGP SRALFMDEIS TGLDSSTTYQ IVNSLRNYVH IFNGTALISL LQPAPETFDL FDDIFLIAEG
0401: EIIYEGPREH VVEFFETMGF KCPPRKGVAD FLQEVTSKKD QMQYWARPDE PYRFIRVREF AEAFQSFHVG RRMGDELAVP FDKKKSHPAA LTTKKYGVGI
0501: KELVNTSFSR EYLLMKRNSF VYYFKFGQLL VMAFATMTLF FRTEMQKKTV VDGSLYTGAL FFILMMLMFN GMSELSMTIA KLPVFYKQRD LLFYPAWVYS
0601: LPPWLLKIPI SFIEAALTAF ITYYVIGFDP NIGRLFKQYI LLVLMNQMAS ALFKMVAALG RNMIVANTFG AFAMLVFFAL GGVVLSKGMY DIKKWWIWGY
0701: WISPIMYGQN AIVANEFFGH SWSRAVPNSS DTLGVTVLKS RGFLPHAYWY WIGTGALLGY VVLFNFGFTL ALTYLNSLGK PQAVLTEEPA SNETELLVVE
0801: ANANKKKGMV LPFEPHSITF DNVIYSVDMP QEMIEQGTQE DRLVLLKGVN GTFRPGVLTA LMGVSGAGKT TLMDVLAGRK TGGYIDGNIT ISGYPKNQQT
0901: FARISGYCEQ TDIHSPHVTV YESLVYSAWL RLPKEVDSNT RKMFIDEVMD LVELTPLRQA LVGLPGESGL STEQRKRLTI AVELVANPSI IFMDEPTSGL
1001: DARAAAIVMR TVRNTVDTGR TVVCTIHQPS IDIFEAFDEL FLLKRGGEEI YVGPLGHESS HLINYFESIQ GISKITEGYN PATWMLEVST TSQEAALGVD
1101: FAQLYKNSEL YKRNKDLIKE LSQPAPGSKD LYFPTQYSQS FWTQCMASLW KQHWSYWRNP PYTAVRFLFT IGIALMFGTM FWDLGGKTRT QQDLSNAMGS
1201: MYTAVLFLGL QNAASVQPVV NVERTVFYRE QAAGMYSAMP YAFAQVFIEM PYVLVQAVVY GLIVYAMIGF EWTAAKFFWY LFFMYGSFLT FTFYGMMAVA
1301: MTPNHHIASV VSSAFYGIWN LFSGFLIPRP SMPVWWEWYY WLCPVSWTLY GLITSQFGDI TEPMADGTSV KQFIKDFYGF REGFLGVVAA MNVIFPLAFA
1401: VIFAIGIKSF NFQKR
Best Arabidopsis Sequence Match ( AT1G15520.1 )
(BLAST)
0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR
Arabidopsis Description
ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.