CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol, plasma membrane

Predictor Summary:

plastid 3
cytosol 1
plasma membrane 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG32860	Sorghum	plasma membrane	90.77	90.77
Os01t0609200-00	Rice	plasma membrane	84.14	84.08
Os01t0609000-00	Rice	plasma membrane	82.57	82.29
KXG32865	Sorghum	plasma membrane	81.0	81.28
KXG32863	Sorghum	cytosol, peroxisome, plasma membrane	80.45	81.12
GSMUA_Achr1P14530_001	Banana	mitochondrion, plasma membrane	61.11	78.35
EER98908	Sorghum	cytosol, nucleus, plasma membrane	76.69	76.8
EES03260	Sorghum	plasma membrane	65.35	74.69
GSMUA_Achr9P02950_001	Banana	plasma membrane	70.2	73.94
GSMUA_Achr6P34530_001	Banana	plasma membrane	66.37	73.62
PGSC0003DMT400005785	Potato	cytosol, peroxisome, plasma membrane	30.55	71.52
VIT_09s0002g05370.t01	Wine grape	mitochondrion, plasma membrane	68.83	70.87
KXG20401	Sorghum	plasma membrane	69.99	70.62
Solyc12g019640.1.1	Tomato	plasma membrane	28.91	69.57
PGSC0003DMT400034130	Potato	cytosol, mitochondrion, peroxisome, plasma membrane, plastid	58.99	69.32
PGSC0003DMT400076208	Potato	plastid	67.87	68.96
KRH09797	Soybean	endoplasmic reticulum	67.26	68.96
VIT_04s0008g04790.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	67.67	68.94
KRH23522	Soybean	mitochondrion	67.19	68.93
KRH47506	Soybean	endoplasmic reticulum	67.19	68.93
Solyc05g053590.2.1	Tomato	cytosol, mitochondrion, peroxisome, plasma membrane	66.51	68.91
Solyc09g091660.2.1	Tomato	plastid	67.81	68.89
EES04729	Sorghum	mitochondrion	67.74	68.72
PGSC0003DMT400076209	Potato	plasma membrane	67.26	68.67
Solyc08g067620.2.1	Tomato	nucleus	68.15	68.62
KRH61824	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	67.81	68.46
KRH52503	Soybean	cytosol, peroxisome, plasma membrane	67.74	68.44
VIT_09s0002g05560.t01	Wine grape	plasma membrane	67.94	68.36
Bra026124.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	65.69	68.01
CDY36570	Canola	cytosol, nucleus, plasma membrane, plastid	65.69	68.01
PGSC0003DMT400061280	Potato	cytosol, nucleus, plasma membrane, plastid	66.64	67.94
Solyc12g098210.1.1	Tomato	plastid	66.17	67.93
CDY39660	Canola	cytosol, nucleus, plasma membrane	65.62	67.84
Solyc12g100180.1.1	Tomato	mitochondrion, nucleus, plasma membrane, plastid	66.51	67.8
AT1G15520.1	Thale cress	plastid	65.82	67.67
EER98758	Sorghum	cytosol, nucleus, plasma membrane	66.78	67.43
KRH16029	Soybean	cytosol	66.3	67.04
KRH67471	Soybean	endoplasmic reticulum	65.82	66.64
KRH05088	Soybean	endoplasmic reticulum	65.82	66.55
PGSC0003DMT400048449	Potato	cytosol, peroxisome, plasma membrane	55.23	66.39
EES08826	Sorghum	mitochondrion	64.39	65.64
KRG95762	Soybean	mitochondrion	63.91	65.38
KRH47220	Soybean	plasma membrane	42.11	64.77
KRH09795	Soybean	endoplasmic reticulum	66.44	64.29
PGSC0003DMT400005783	Potato	cytosol, peroxisome, plasma membrane	67.87	62.85
PGSC0003DMT400043433	Potato	endoplasmic reticulum, plasma membrane	6.43	61.84
OQU76555	Sorghum	mitochondrion, plasma membrane	52.29	59.16
EES00201	Sorghum	plasma membrane	57.35	58.84
Solyc12g019620.1.1	Tomato	cytosol, nucleus, plasma membrane	33.15	57.95
KRG95752	Soybean	cytosol, peroxisome, plasma membrane	63.23	57.42
KXG37059	Sorghum	cytosol, mitochondrion, peroxisome, plasma membrane	54.07	56.34
OQU81756	Sorghum	plasma membrane	47.85	55.69
KXG36359	Sorghum	plastid	55.37	55.59
EES01392	Sorghum	cytosol, peroxisome, plasma membrane	55.02	54.36
OQU80771	Sorghum	plasma membrane	41.15	51.28
VIT_04s0008g04840.t01	Wine grape	plasma membrane	37.12	48.53
OQU91497	Sorghum	cytosol, nucleus, plasma membrane	45.39	48.08
OQU89274	Sorghum	plasma membrane	31.65	47.24

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	EntrezGene:8054360	InterPro:AAA+_ATPase	InterPro:ABCG_PDR_1	InterPro:ABCG_PDR_2
InterPro:ABC_2_trans	InterPro:ABC_trans_N	InterPro:ABC_transporter-like	UniProt:C5XQE2	EnsemblPlants:EES03255	ProteinID:EES03255
ProteinID:EES03255.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085
InterPro:IPR003439	InterPro:P-loop_NTPase	InterPro:PDR_assoc	PFAM:PF00005	PFAM:PF01061	PFAM:PF08370
PFAM:PF14510	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF273	SMART:SM00382	EnsemblPlantsGene:SORBI_3003G215600
SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0001A84F3C	RefSeq:XP_002458135.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr3:-:55053821..55062277

Molecular Weight (calculated)

164340.0 Da

IEP (calculated)

8.074

GRAVY (calculated)

0.107

Length

1463 amino acids

Sequence
(BLAST)

0001: MDAAAELQKV ASMRRDSGGS RSGSSAWWRA PDAFSRSSSR MEEDDEEALR WAALERLPTC DRVRRAILPL GGNGDGHGHG GGDAATQVVD VLGLGPRERR
0101: ALLERLVRVA DEDNERFLLK LKERVERVGI DMPTIEVRFK HLRAEADVRV GTSGLPTVLN SITNKLEEVA NALHVRRSRK QAMPILHDVS GIVKPRRMTL
0201: LLGPPGSGKT TLLLALAGRL DKDLKVSGKV TYNGHEMDEF VPERTAAYIS QHDLHIGEMT VRETLEFSAR CQGVGTRFDM LTELSRREKV GNIKPDADID
0301: AFMKACAMRG QEANVISDYI LKILGLEICA DTMVGDDMLR GISGGQRKRV TTGEMLVGPA NALFMDEIST GLDSSTTFQI IKSLRQAIHI LGGTALISLL
0401: QPAPETYDLF DDIILLSDGQ IVYQGPRESV LEFFLSLGFK CPERKGVADF LQEVTSRKDQ KQYWVWHDKP YRYVSVKEFA TAFQCFHVGR AIANELAIPF
0501: DKSKNHPAAL TTSKYGVSAW ELFKANIDRE MLLMKRNSFV YIFRTLQLMT VSIIAMTLFF RTKMHRDSVT DGGIYLGALF FAVIMIMFNG LSELALTIIK
0601: LPVFFKQRDL LFFPAWAYTI PTWILKIPIS FVEVGGFVFM AYYVIGIDPN VGRFFKQYLL LLALNQMAAS LFRFVGGAAR NMIVANVFGS FMLLIFMVLG
0701: GFILVRDKVK KWWIWGYWIS PLMYAQNAIS VNEMLGHSWD KILNSSVSYE TLGVQSLKSR GVFPEAKWYW IGLGALLGFV MLFNCLFTLA LAYLKPYGKS
0801: HPSISEEELN EKYANLNGNV VAEDNLPPGS SYLAAVDITR SDSATIENHS GTMQRGMVLP FAPLSLTFSN IKYFVDMPQE MKTHDVVGDR LELLKCVSGS
0901: FRPGVLTALM GVSGAGKTTL MDVLAGRKTS GYIEGNISIS GYPKKQETFA RVSGYCEQND IHSPQVTVYE SLVFSAWLRL PSDVDLNTRK MFIEEVMELV
1001: ELKPLRNALV GLPGVNGLST EQRKRLTIAV ELVANPSIIF MDEPTSGLDA RAAAIVMRTV RNTVDTGRTV VCTIHQPSID IFEAFDELFL MKRGGEEIYV
1101: GPLGHHSSEL IKYFEGIHGV KKIKDGYNPA TWMLEVTTIS QEEILGVDFS DLYKKSELYQ RNKALIQELS EPSVGSTDLH FRNQYSQSFF MQCLACLWKQ
1201: NLSYWRNPAY NAVRLFFTTI IALIFGTIFW DLGGKMGQSQ DLFNAMGSMY AAVMFIGVLN ATSVQPVVSV ERTVFYRERA AGMYSALPYA FGQVTIELPY
1301: TLTQATVYGI IVYSMIGFEW TVAKFFWYLF FMYFTFLYFT FYGMMAVGLT PSYHVASIVS SAFYGIWNLF SGFIIPRPKV PIWWKWYCWA CPVAWTLYGL
1401: VVSQFGDITM PMDNGVPVNV FVENYFGFKH SWLGVVAAVV MAFTIFFASL FGFAIMKLNF QRR

Best Arabidopsis Sequence Match ( AT1G15210.1 )
(BLAST)

0001: MDYDPAHAMS RGGSMRQTIS RSVSKASRNM EDIFNTSSRR TKSVNEDEEA LKWASIEKLP TYNRLRTSLM PELGEDDVYG NQILNKAVDV TKLDGEERQK
0101: FIDMVFKVAE QDNERILTKL RNRIDRVGIQ LPTVEVRYDH LTVKADCYTG DRSLPSLLNA VRNMGEAALG MIGIRLAKKA QLTILKDVSG IVKPSRMTLL
0201: LGPPSSGKTT LLLALAGKLD KSLDVSGEVT YNGYRLNEFV PIKTSAYISQ NDLHVGIMTV KETLDFSARC QGVGTRYDLL NELARREKDA GIFPEADVDL
0301: FMKASAAQGV KSSLITDYTL KILGLDICKD TIVGDDMMRG ISGGQKKRVT TGEMIVGPTK TLFMDEISTG LDSSTTFQIV KCLQQIVHLT EATVLISLLQ
0401: PAPETFDLFD DIILLSEGQI VYQGPRDHIL EFFESFGFKC PERKGTADFL QEVTSKKDQE QYWVDPNRPY RYIPVSEFAS SFKKFHVGSK LSNELSVPYD
0501: KSKSHKAALM FDKYSIKKTE LLKSCWDKEW MLMKRNSFFY VFKTVQIIII AAITSTLYLR TEMHTRNEID ANIYVGSLLF AMIVNMFNGL AEMAMTIQRL
0601: PVFYKQRDLL FHPPWTYTLP TFLLGIPISI FESTAWMVVT YYSIGYAPDA ERFFKQFLII FLIQQMAAGI FRFIASTCRT MTIANTGGVL VLLVVFLTGG
0701: FLLPRSEIPV WWRWAYWISP LSYAFNAITV NELFAPRWMN KMSGNSTTRL GTSVLNIWDV FDDKNWYWIG VGGLLGFTVI FNGFFTLALT YLDPLGKAQA
0801: ILPKEEDEEA KGKAGSNKET EMESVSAKKG MVLPFTPLAM SFDDVKYFVD MPAEMREQGV QETRLQLLKG VTSAFRPGVL TALMGVSGAG KTTLMDVLAG
0901: RKTGGYIEGD VRVSGFPKKQ ETFARISGYC EQTDIHSPQV TVRESLIFSA FLRLAKEVSK EDKLMFVDQV MELVELVDLR DAIVGLPGVT GLSTEQRKRL
1001: TIAVELVANP SIIFMDEPTS GLDARAAAIV MRAVRNTVDT GRTVVCTIHQ PSIDIFEAFD ELLLMKRGGH VIYSGPLGRN SHKVVEYFES FPGVPKIPEK
1101: YNPATWMLEA SSLAAELKLG VDFAELYKAS ALCQRNKALV QELSVPPQGA TDLYFATQFS QNTWGQFKSC LWKQWWTYWR SPDYNLVRFI FTLATSLMIG
1201: SVFWQIGGKR SNVQDLTMVI GAIYAAVVFV GINNCSTVQP MVAVERTVFY REKAAGMYSA IPYAISQVTC ELPYVLIQTT YYSLIIYSMV GFEWKASKFL
1301: WFIFINYFSF LYWTYYGMMT VSLTPNQQVA SIFASAFYGI FNLFSGFFIP RPKIPKWWVW YYWICPVAWT IYGLITSQYG DVETPIALLG GAPGLTVKQY
1401: IKDQYGFESD YMGPVAGVLV GFTVFFAFIF AFCIKTLNFQ SR

Arabidopsis Description

ABCG35PDR7 [Source:UniProtKB/TrEMBL;Acc:A0A178WAD4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.