Factsheet for VIT_09s0002g05370.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

plastid 1
mitochondrion 4
plasma membrane 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0002g05560.t01	Wine grape	plasma membrane	87.12	85.14
GSMUA_Achr1P14530_001	Banana	mitochondrion, plasma membrane	62.07	77.3
KRH09797	Soybean	endoplasmic reticulum	77.2	76.87
KRH23522	Soybean	mitochondrion	77.13	76.86
KRH47506	Soybean	endoplasmic reticulum	75.23	74.96
Solyc09g091660.2.1	Tomato	plastid	75.86	74.86
Solyc05g053590.2.1	Tomato	cytosol, mitochondrion, peroxisome, plasma membrane	74.31	74.79
PGSC0003DMT400076208	Potato	plastid	75.65	74.65
PGSC0003DMT400061280	Potato	cytosol, nucleus, plasma membrane, plastid	75.3	74.56
Solyc12g098210.1.1	Tomato	plastid	74.67	74.46
PGSC0003DMT400034130	Potato	cytosol, mitochondrion, peroxisome, plasma membrane, plastid	65.09	74.3
PGSC0003DMT400076209	Potato	plasma membrane	74.74	74.11
Solyc12g100180.1.1	Tomato	mitochondrion, nucleus, plasma membrane, plastid	74.81	74.08
VIT_04s0008g04790.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	74.17	73.4
Bra026124.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	72.77	73.18
Os01t0609300-01	Rice	plasma membrane	66.57	73.16
GSMUA_Achr9P02950_001	Banana	plasma membrane	71.5	73.15
CDY36570	Canola	cytosol, nucleus, plasma membrane, plastid	72.7	73.11
CDY39660	Canola	cytosol, nucleus, plasma membrane	72.7	73.0
AT1G15520.1	Thale cress	plastid	72.27	72.17
GSMUA_Achr6P34530_001	Banana	plasma membrane	66.78	71.95
KRH67471	Soybean	endoplasmic reticulum	72.98	71.76
EES03260	Sorghum	plasma membrane	64.6	71.72
PGSC0003DMT400043433	Potato	endoplasmic reticulum, plasma membrane	7.67	71.71
TraesCS3A01G217900.1	Wheat	cytosol	72.7	71.05
TraesCS3D01G234400.1	Wheat	plasma membrane	72.7	71.05
HORVU3Hr1G053350.8	Barley	vacuole	72.84	71.04
TraesCS3B01G248400.1	Wheat	cytosol, peroxisome, plasma membrane	72.62	70.98
Os01t0609900-02	Rice	plasma membrane	69.32	70.97
Zm00001d011315_P002	Maize	plasma membrane	71.99	70.84
Os08t0384500-01	Rice	plasma membrane	38.0	70.77
KXG32863	Sorghum	cytosol, peroxisome, plasma membrane	71.85	70.37
KRG95762	Soybean	mitochondrion	70.72	70.28
KXG32865	Sorghum	plasma membrane	71.85	70.03
KRH09795	Soybean	endoplasmic reticulum	74.38	69.91
TraesCS3A01G218000.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	71.08	69.7
Zm00001d044443_P001	Maize	cytosol, mitochondrion, nucleus, plasma membrane	71.01	69.68
TraesCS2A01G483300.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	70.94	69.57
TraesCS3B01G248500.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	70.87	69.5
TraesCS3D01G234300.2	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	70.87	69.5
Os01t0609200-00	Rice	plasma membrane	71.36	69.26
Zm00001d011319_P003	Maize	cytosol, mitochondrion, peroxisome, plasma membrane	71.29	69.24
HORVU7Hr1G092510.2	Barley	plasma membrane	70.16	69.19
TraesCS7B01G292700.1	Wheat	plasma membrane	69.53	69.09
Os01t0342750-01	Rice	plasma membrane	34.06	69.04
TraesCS7D01G386600.1	Wheat	plasma membrane	70.16	69.0
TraesCS7A01G391100.1	Wheat	plasma membrane	69.95	68.88
EES03255	Sorghum	cytosol, peroxisome, plasma membrane, plastid	70.87	68.83
HORVU3Hr1G071470.1	Barley	cytosol, mitochondrion, nucleus, plasma membrane	69.53	68.61
KRH47220	Soybean	plasma membrane	45.88	68.56
TraesCS3A01G272800.2	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	69.32	68.4
HORVU3Hr1G053380.1	Barley	cytosol, mitochondrion, peroxisome, plasma membrane	70.87	68.27
HORVU7Hr1G092380.8	Barley	cytosol	69.46	68.21
TraesCS3D01G272200.2	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	69.04	68.12
Os01t0609000-00	Rice	plasma membrane	70.37	68.12
TraesCS3B01G523700.1	Wheat	mitochondrion	51.23	68.04
TraesCS7D01G386500.1	Wheat	plasma membrane	69.25	67.77
TraesCS7A01G391000.1	Wheat	plasma membrane	69.18	67.7
TraesCSU01G097600.2	Wheat	plasma membrane	69.11	67.63
EER98908	Sorghum	cytosol, nucleus, plasma membrane	69.46	67.56
GSMUA_Achr9P01490_001	Banana	plasma membrane	70.72	67.31
KXG32860	Sorghum	plasma membrane	68.9	66.92
TraesCS3B01G306400.2	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	69.25	66.67
TraesCS3B01G524400.1	Wheat	cytosol, peroxisome, plasma membrane	67.07	66.27
TraesCS5D01G190600.1	Wheat	cytosol, nucleus, plasma membrane	67.49	66.23
EER98758	Sorghum	cytosol, nucleus, plasma membrane	67.49	66.18
TraesCS5B01G183500.1	Wheat	cytosol, nucleus, plasma membrane	67.42	66.16
TraesCS3A01G479800.1	Wheat	cytosol, nucleus, plasma membrane	67.28	66.16
TraesCS3D01G474700.1	Wheat	cytosol, nucleus, plasma membrane	67.28	66.16
HORVU3Hr1G105140.4	Barley	cytosol, peroxisome, plasma membrane	67.14	65.98
HORVU5Hr1G056280.6	Barley	cytosol, nucleus, plasma membrane	67.21	65.86
TraesCS5A01G185500.1	Wheat	cytosol, nucleus, plasma membrane	64.18	65.33
TraesCS2B01G149900.1	Wheat	cytosol, peroxisome, plasma membrane	57.07	65.3
KXG20401	Sorghum	plasma membrane	66.43	65.1
Zm00001d044442_P036	Maize	plasma membrane	71.92	64.93
TraesCS2D01G130000.1	Wheat	cytosol, peroxisome, plasma membrane	64.18	63.73
Os09t0333000-00	Rice	plasma membrane	36.31	63.55
VIT_08s0007g03710.t01	Wine grape	plastid	63.83	62.51
KRG95752	Soybean	cytosol, peroxisome, plasma membrane	69.88	61.64
VIT_06s0061g01490.t01	Wine grape	plastid	62.77	61.35
Os09t0332300-00	Rice	plasma membrane	35.54	61.14
TraesCS2A01G127800.1	Wheat	cytosol, peroxisome, plasma membrane	32.79	59.21
VIT_13s0074g00680.t01	Wine grape	plastid	61.37	59.08
TraesCS6A01G107100.1	Wheat	mitochondrion, plasma membrane	52.01	58.74
TraesCS6D01G094800.1	Wheat	plasma membrane	38.0	58.32
VIT_06s0004g06560.t01	Wine grape	mitochondrion, plasma membrane	50.25	56.09
Os01t0516900-00	Rice	plasma membrane	27.45	55.56
VIT_14s0060g00470.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	52.43	51.45
VIT_04s0008g04840.t01	Wine grape	plasma membrane	39.83	50.58

Protein Annotations

EntrezGene:100261720	wikigene:100261720	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABCG_PDR_1
InterPro:ABCG_PDR_2	InterPro:ABC_2_trans	InterPro:ABC_trans_N	InterPro:ABC_transporter-like	ProteinID:CCB59522	ProteinID:CCB59522.1
UniProt:F6HX52	EMBL:FN596494	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626
GO:GO:0055085	InterPro:IPR003439	EntrezGene:LOC100261720	wikigene:LOC100261720	InterPro:P-loop_NTPase	InterPro:PDR_assoc
PFAM:PF00005	PFAM:PF01061	PFAM:PF08370	PFAM:PF14510	PFscan:PS50893	PANTHER:PTHR19241
PANTHER:PTHR19241:SF444	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI000210A4DA	ArrayExpress:VIT_09s0002g05370
EnsemblPlantsGene:VIT_09s0002g05370	EnsemblPlants:VIT_09s0002g05370.t01	RefSeq:XP_003632871	RefSeq:XP_003632871.1	SEG:seg	:

Description

No Description!

Coordinates

chr9:-:5115505..5122760

Molecular Weight (calculated)

160568.0 Da

IEP (calculated)

7.790

GRAVY (calculated)

0.036

Length

1421 amino acids

Sequence
(BLAST)

0001: MATADTYRAS GSLRRNGSSI WRSSGADVFS RSSRDEDDEE ALKWAALEKL PTYNRLRRGL LMGSEGEASE IDIHNLGFQE KKNLVERLVK VAEEDNEKFL
0101: LKLKNRIDRV GIDVPEIEVR FEHLTIDAEA FVGSRALPSF HNFIFNKLEG ILNAVRILPS KKRKFTILND VSGIIKPRRL TLLLGPPSSG KTTLLLALAG
0201: KLDPNLKVMG RVTYNGHGMN EFVPQRTAAY ISQHDTHIGE MTVRETLAFS ARCQGVGDRY DMLAELSRRE KAANIKPDPD LDVFMKAAAT EGQKENVVTD
0301: YTLKILGLDI CADTMVGDEM IRGISGGQRK RVTTGEMLVG PSKALFMDEI STGLDSSTTF QIINSLKQTI HILNGTAVIS LLQPAPETYN LFDDIILLSD
0401: SQIVYQGPRE DVLEFFESIG FKCPERKGEA DFLQEVTSRK DQAQYWARKD VPYSFVTVKE FAEAFQSFHI GRKVADELAS PFDRAKSHPA ALTTKKYGVR
0501: KKELLDANMS REYLLMKRNS FVYIFKLTQL AVVAVIAMTL FLRTEMNKNS TEDGSIYTGA LFFTVVMIMF NGMAELAMTI AKLPVFYKQR DFLFYPAWAY
0601: ALPTWVLKIP ITFVEVAVWV FITYYVIGFD PNVERLFRQY LLLLLVNQMA SGLFRFIAAA GRNMIVASTF GAFAVLMLMA LGGFILSHDN VKKWWIWGYW
0701: SSPLMYAQNA IVVNEFLGKS WSKNVTNSTE SLGITVLKSR GFFTDAHWYW IGAGALLGFI FVFNFFYTLC LNYLNPFEKP QAVITEESDN AKTATTEHMV
0801: EAIAEGNHNK KKGMVLPFQP HSITFDDIRY SVDMPEEMKS QGALEDRLEL LKGVSGAFRP GVLTALMGVS GAGKTTLMDV LAGRKTGGYI EGNISISGYP
0901: KKQETFARIS GYCEQNDIHS PHVTVHESLL YSAWLRLPSD VNSETRKMFI EEVMELVELT PLRDALVGLP GVNGLSTEQR KRLTIAVELV ANPSIIFMDE
1001: PTSGLDARAA AIVMRTVRNT VDTGRTVVCT IHQPSIDIFE AFDELLLMKR GGQEIYVGPL GRHSSHLINY FEGIEGVSKI KDGYNPATWM LEVTTGAQEG
1101: TLGVDFTEIY KNSDLYRRNK DLIKELSQPA PGTKDLYFAT QYSQPFFTQF LACLWKQRWS YWRNPPYTAV RFLFTTFIAL MFGLIFWDLG TRRTRQQDLL
1201: NAMGSMYAAV LFLGVQNAQS VQPVIVVERT VFYRERAAGM YSALPYAFGQ ALVEIPYVFA QAVVYGVIVY GMIGFEWTAT KFFWYLFFMF CTLLYFTFYG
1301: MMAVAATPNQ HIASIIAATF YTLWNLFSGF IVPRNRIPVW WRWYCWICPV AWTLYGLVAS QFGDIQSTLL ENNQTVKQFL DDYFGFKHDF LGVVAAVVVG
1401: FVVLFLFIFA YAIKAFNFQK R

Best Arabidopsis Sequence Match ( AT1G15520.1 )
(BLAST)

0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR

Arabidopsis Description

ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.