Factsheet for TraesCS3B01G248500.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 2
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G234300.2	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	99.52	99.52
TraesCS3A01G218000.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	99.45	99.45
HORVU3Hr1G053380.1	Barley	cytosol, mitochondrion, peroxisome, plasma membrane	98.48	96.75
EES03260	Sorghum	plasma membrane	78.74	89.14
Zm00001d044443_P001	Maize	cytosol, mitochondrion, nucleus, plasma membrane	87.58	87.64
Zm00001d011319_P003	Maize	cytosol, mitochondrion, peroxisome, plasma membrane	88.41	87.56
TraesCS3B01G306400.2	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	82.06	80.56
GSMUA_Achr1P14530_001	Banana	mitochondrion, plasma membrane	60.73	77.13
TraesCS3B01G248400.1	Wheat	cytosol, peroxisome, plasma membrane	74.81	74.55
GSMUA_Achr9P02950_001	Banana	plasma membrane	70.32	73.36
GSMUA_Achr6P34530_001	Banana	plasma membrane	66.74	73.31
PGSC0003DMT400005785	Potato	cytosol, peroxisome, plasma membrane	31.4	72.8
VIT_09s0002g05370.t01	Wine grape	mitochondrion, plasma membrane	69.5	70.87
Solyc12g019640.1.1	Tomato	plasma membrane	29.61	70.56
TraesCS7B01G292700.1	Wheat	plasma membrane	69.36	70.28
KRH23522	Soybean	mitochondrion	68.25	69.35
VIT_09s0002g05560.t01	Wine grape	plasma membrane	69.5	69.26
KRH09797	Soybean	endoplasmic reticulum	67.91	68.96
VIT_04s0008g04790.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	68.12	68.73
TraesCS3B01G523700.1	Wheat	mitochondrion	50.59	68.5
PGSC0003DMT400043433	Potato	endoplasmic reticulum, plasma membrane	7.18	68.42
Solyc05g053590.2.1	Tomato	cytosol, mitochondrion, peroxisome, plasma membrane	66.67	68.41
KRH47506	Soybean	endoplasmic reticulum	67.22	68.3
PGSC0003DMT400034130	Potato	cytosol, mitochondrion, peroxisome, plasma membrane, plastid	58.66	68.27
TraesCS3B01G524400.1	Wheat	cytosol, peroxisome, plasma membrane	67.7	68.22
PGSC0003DMT400076208	Potato	plastid	67.77	68.19
TraesCS5B01G183500.1	Wheat	cytosol, nucleus, plasma membrane	67.98	68.02
Solyc09g091660.2.1	Tomato	plastid	67.56	67.99
Solyc08g067620.2.1	Tomato	nucleus	68.12	67.93
KRH52503	Soybean	cytosol, peroxisome, plasma membrane	67.84	67.89
PGSC0003DMT400061280	Potato	cytosol, nucleus, plasma membrane, plastid	67.15	67.8
Solyc12g098210.1.1	Tomato	plastid	66.67	67.79
KRH61824	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	67.7	67.7
CDY36570	Canola	cytosol, nucleus, plasma membrane, plastid	65.91	67.59
CDY39660	Canola	cytosol, nucleus, plasma membrane	65.98	67.56
Bra026124.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	65.84	67.52
TraesCS6B01G205900.1	Wheat	plasma membrane	67.22	67.45
Solyc12g100180.1.1	Tomato	mitochondrion, nucleus, plasma membrane, plastid	66.74	67.39
TraesCS2B01G149900.1	Wheat	cytosol, peroxisome, plasma membrane	57.42	66.99
AT1G15520.1	Thale cress	plastid	65.77	66.97
PGSC0003DMT400076209	Potato	plasma membrane	66.05	66.78
KRH16029	Soybean	cytosol	66.6	66.69
KRH67471	Soybean	endoplasmic reticulum	66.05	66.23
KRH05088	Soybean	endoplasmic reticulum	65.91	66.0
KRG95762	Soybean	mitochondrion	64.32	65.17
PGSC0003DMT400048449	Potato	cytosol, peroxisome, plasma membrane	54.66	65.08
KRH09795	Soybean	endoplasmic reticulum	65.84	63.1
KRH47220	Soybean	plasma membrane	41.13	62.67
TraesCS7B01G271500.1	Wheat	cytosol	26.5	62.54
PGSC0003DMT400005783	Potato	cytosol, peroxisome, plasma membrane	67.43	61.84
KRG95752	Soybean	cytosol, peroxisome, plasma membrane	64.18	57.73
TraesCS3B01G141700.2	Wheat	golgi, unclear	57.0	57.72
Solyc12g019620.1.1	Tomato	cytosol, nucleus, plasma membrane	32.51	56.27
TraesCS5B01G572600.1	Wheat	plastid	56.31	56.16
TraesCS7B01G088800.1	Wheat	plastid	56.11	56.03
TraesCS7B01G000200.1	Wheat	plastid	56.25	55.94
TraesCS5B01G449500.1	Wheat	plastid	56.04	55.88
TraesCS2B01G606700.2	Wheat	plastid	55.69	55.2
TraesCS7B01G167100.1	Wheat	cytosol, nucleus, plasma membrane	47.83	51.33
TraesCS5B01G155400.3	Wheat	plasma membrane	49.83	50.49
TraesCS4B01G054700.1	Wheat	cytosol, peroxisome, plasma membrane	50.03	50.49
TraesCS4B01G332300.3	Wheat	cytosol, nucleus, plasma membrane	46.24	49.78
TraesCS4B01G331400.3	Wheat	plasma membrane	34.3	49.75
TraesCS5B01G517700.1	Wheat	plasma membrane	32.78	49.22
TraesCS7B01G381200.2	Wheat	plasma membrane	48.24	49.12
TraesCS7B01G381000.1	Wheat	cytosol, nucleus, plasma membrane	46.86	48.88
VIT_04s0008g04840.t01	Wine grape	plasma membrane	37.13	48.08
TraesCS7B01G005200.1	Wheat	plasma membrane	43.69	47.92

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABCG_PDR_1	InterPro:ABCG_PDR_2	InterPro:ABC_2_trans
InterPro:ABC_trans_N	InterPro:ABC_transporter-like	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439
InterPro:P-loop_NTPase	InterPro:PDR_assoc	PFAM:PF00005	PFAM:PF01061	PFAM:PF08370	PFAM:PF14510
PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF352	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS3B01G248500	EnsemblPlants:TraesCS3B01G248500.1	TIGR:cd03232	TIGR:cd03233	SEG:seg	:

Description

No Description!

Coordinates

chr3B:-:395909921..395917394

Molecular Weight (calculated)

163728.0 Da

IEP (calculated)

7.250

GRAVY (calculated)

0.015

Length

1449 amino acids

Sequence
(BLAST)

0001: MDREIHRVTS LRRDSSLWRR GDDVFSRTSS RFQEEEDDEE ALRWAALERL PTYDRVRRGI LTVEDGGEKV EVDVGRLGAH ESRALIERLV RAADDDHENF
0101: LLKLKERMDR VGIDYPTIEV RFEKLEIEAE VRVGNRGLPT LINSVTNTLE AVGNALHVIP SRKQAMTVLH DVSGIIKPRR MTLLLGPPGS GKTTLLLAMA
0201: GKLDKDLKVS GKVTYNGHGM DEFVPQRTAA YISQHDLHIG EMTVRETLAF SARCQGVGTR YEMLTELARR EKAANIKPDH DIDVYMKASA MGGQESSIVT
0301: EYILKILGLD ICADTLVGNE MLRGISGGQR KRVTTGEMLV GPAKALFMDE ISTGLDSSTT YQIVNSLRQT IHILGGTAVI SLLQPAPETY NLFDDIILLS
0401: DGQVVYQGPR ENVLEFFEFM GFRCPGRKGV ADFLQEVTSK KDQEQYWYRG DRPYRFVPVK QFADAFRSFH VGKSIENELK VPFDRTRSHP AALATSKFGV
0501: SRMELLKATI DRELLLMKRN AFMYIFKAVN LTLMAFIVMT TFFRTNMRRN VEYGTIYLGA LFFALDTIMF NGFAELAMTV MKLPVFFKQR DLLFFPAWAY
0601: TIPSWILQIP ITFVEVGVYV FTTYYVIGFD PSVSRFFKQY LLLLAINQMS SSLFRFIAGI GRDMVVSHTF GPLSLLAFAA LGGFILARPD IKKWWIWGYW
0701: ISPLSYAQNA ISTNEFLGPS WNQIVSGTNE TIGVTVLKNR GIFTEAKWYW IGLGAMVGYT LLFNLLYTLA LSVLSPLTDA HPSMSEEELK EKHANLTGKA
0801: LDGHKEKNSR KQELELSHIS DRNSGISGVD SSDSRKRLVL PFTPLSLTFN DTKYSVDMPE AMKAQGVTED RLLLLKGVSG SFRPGVLTAL MGVSGAGKTT
0901: LMDVLAGRKT GGYIEGEITV SGYPKKQETF ARISGYCEQN DIHSPHVTIY ESLVFSAWLR LPAEVDSERR KMFIEEIMDL VELTSLRGAL VGLPGVNGLS
1001: TEQRKRLTIA VELVANPSII FMDEPTSGLD ARAAAIVMRT VRNTVNTGRT VVCTIHQPSI DIFEAFDELF LMKRGGEEIY VGPVGQNSAN LIEYFEEIEG
1101: ISKIKDGYNP ATWMLEVSSS AQEEMLGIDF AEVYRQSELY QRNKELIKEL SMPPPGSRDL NFPTQYSRSF VTQCLACLWK QKLSYWRNPS YTAVRLLFTI
1201: VIALMFGTMF WDLGSKTRRS QDLFNAMGSM YAAVLYIGVQ NSGSVQPVVV VERTVFYRER AAGMYSAFPY AFGQVAIEFP YVLVQALIYG GLVYSMIGFE
1301: WTVAKFLWYL FFMYFTMLYF TFYGMMAVGL TPNESIAAII SSAFYNVWNL FSGYLIPRPK LPIWWRWYSW ICPVAWTLYG LVASQFGDIQ QPLDQGVPGP
1401: QITVAQFVTD YFGFHHDFLW VVAVVHVAFT VLFAFLFSFA IMRFNFQKR

Best Arabidopsis Sequence Match ( AT1G15520.2 )
(BLAST)

0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVLQKNIIE SEIYDFSLRK PQIQTSICSR FSSRSHTFSC KR

Arabidopsis Description

ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.