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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:
  • cytosol 2
  • plasma membrane 2
  • mitochondrion 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:cytosol
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2A01G127800.1 Wheat cytosol, peroxisome, plasma membrane 48.51 51.59
Os01t0516900-00 Rice plasma membrane 42.05 50.14
VIT_04s0008g04790.t01 Wine grape cytosol, peroxisome, plasma membrane, plastid 62.72 36.56
Solyc08g067620.2.1 Tomato nucleus 63.44 36.55
KRH61824 Soybean cytosol, mitochondrion, peroxisome, plasma membrane 62.37 36.02
KRH52503 Soybean cytosol, peroxisome, plasma membrane 62.01 35.84
GSMUA_Achr6P34530_001 Banana plasma membrane 55.2 35.03
Solyc09g091660.2.1 Tomato plastid 58.78 34.17
Zm00001d011315_P002 Maize plasma membrane 58.78 34.07
KRH16029 Soybean cytosol 58.66 33.93
Solyc12g098210.1.1 Tomato plastid 57.59 33.82
KRH05088 Soybean endoplasmic reticulum 58.42 33.79
TraesCS3B01G248400.1 Wheat cytosol, peroxisome, plasma membrane 58.42 33.63
GSMUA_Achr9P02950_001 Banana plasma membrane 55.79 33.62
Solyc12g100180.1.1 Tomato mitochondrion, nucleus, plasma membrane, plastid 57.59 33.59
KXG32863 Sorghum cytosol, peroxisome, plasma membrane 58.06 33.49
TraesCS3A01G217900.1 Wheat cytosol 58.06 33.42
HORVU3Hr1G053350.8 Barley vacuole 58.18 33.42
TraesCS3D01G234400.1 Wheat plasma membrane 57.95 33.36
KXG32865 Sorghum plasma membrane 57.95 33.26
Solyc05g053590.2.1 Tomato cytosol, mitochondrion, peroxisome, plasma membrane 56.03 33.22
EES03255 Sorghum cytosol, peroxisome, plasma membrane, plastid 57.95 33.15
TraesCS7B01G292700.1 Wheat plasma membrane 56.63 33.15
GSMUA_Achr9P01490_001 Banana plasma membrane 59.02 33.09
TraesCS7D01G386600.1 Wheat plasma membrane 57.11 33.08
Os01t0609200-00 Rice plasma membrane 57.83 33.06
TraesCS7A01G391100.1 Wheat plasma membrane 56.99 33.06
HORVU7Hr1G092380.8 Barley cytosol 57.11 33.03
HORVU7Hr1G092510.2 Barley plasma membrane 56.87 33.03
Os01t0609300-01 Rice plasma membrane 50.9 32.95
TraesCS7D01G386500.1 Wheat plasma membrane 57.11 32.92
Os01t0609900-02 Rice plasma membrane 54.48 32.85
TraesCS7A01G391000.1 Wheat plasma membrane 56.99 32.85
TraesCSU01G097600.2 Wheat plasma membrane 56.99 32.85
KXG32860 Sorghum plasma membrane 57.35 32.81
HORVU3Hr1G071470.1 Barley cytosol, mitochondrion, nucleus, plasma membrane 56.15 32.64
TraesCS3A01G272800.2 Wheat cytosol, mitochondrion, nucleus, plasma membrane 56.03 32.57
TraesCS3D01G272200.2 Wheat cytosol, mitochondrion, nucleus, plasma membrane 56.03 32.57
Os01t0609000-00 Rice plasma membrane 57.11 32.56
TraesCS3B01G248500.1 Wheat cytosol, mitochondrion, peroxisome, plasma membrane 56.27 32.51
TraesCS3D01G234300.2 Wheat cytosol, mitochondrion, peroxisome, plasma membrane 56.27 32.51
TraesCS3A01G218000.1 Wheat cytosol, mitochondrion, peroxisome, plasma membrane 56.15 32.44
Zm00001d044443_P001 Maize cytosol, mitochondrion, nucleus, plasma membrane 56.03 32.39
TraesCS5A01G185500.1 Wheat cytosol, nucleus, plasma membrane 53.52 32.09
Zm00001d011319_P003 Maize cytosol, mitochondrion, peroxisome, plasma membrane 56.03 32.06
TraesCS2A01G483300.1 Wheat cytosol, mitochondrion, peroxisome, plasma membrane 55.32 31.95
HORVU3Hr1G053380.1 Barley cytosol, mitochondrion, peroxisome, plasma membrane 56.27 31.93
TraesCS3B01G306400.2 Wheat cytosol, mitochondrion, nucleus, plasma membrane 56.15 31.84
EES03260 Sorghum plasma membrane 48.63 31.8
TraesCS5B01G183500.1 Wheat cytosol, nucleus, plasma membrane 54.72 31.63
TraesCS3B01G524400.1 Wheat cytosol, peroxisome, plasma membrane 54.24 31.57
TraesCS3D01G474700.1 Wheat cytosol, nucleus, plasma membrane 54.48 31.56
GSMUA_Achr1P14530_001 Banana mitochondrion, plasma membrane 43.01 31.55
TraesCS5D01G190600.1 Wheat cytosol, nucleus, plasma membrane 54.36 31.42
HORVU5Hr1G056280.6 Barley cytosol, nucleus, plasma membrane 54.36 31.38
EER98908 Sorghum cytosol, nucleus, plasma membrane 54.72 31.35
HORVU3Hr1G105140.4 Barley cytosol, peroxisome, plasma membrane 54.12 31.33
TraesCS3A01G479800.1 Wheat cytosol, nucleus, plasma membrane 53.88 31.21
Zm00001d044442_P036 Maize plasma membrane 58.54 31.13
EER98758 Sorghum cytosol, nucleus, plasma membrane 53.88 31.12
KXG20401 Sorghum plasma membrane 53.52 30.9
TraesCS2D01G130000.1 Wheat cytosol, peroxisome, plasma membrane 52.45 30.68
Solyc11g007300.1.1 Tomato plastid 52.33 29.92
Solyc11g007280.1.1 Tomato plastid 51.49 29.36
Solyc11g067000.1.1 Tomato extracellular, plastid 51.13 29.25
Solyc05g018510.2.1 Tomato cytosol, peroxisome, plasma membrane 49.22 28.99
Solyc05g055330.2.1 Tomato plastid 51.02 28.89
TraesCS2B01G149900.1 Wheat cytosol, peroxisome, plasma membrane 42.65 28.74
Solyc03g120980.2.1 Tomato plastid 50.78 28.33
Solyc06g065670.2.1 Tomato plasma membrane 47.43 28.2
TraesCS3B01G523700.1 Wheat mitochondrion 35.84 28.04
Solyc01g101070.2.1 Tomato plastid 46.24 26.75
Solyc02g081870.2.1 Tomato unclear 44.33 26.48
TraesCS6A01G107100.1 Wheat mitochondrion, plasma membrane 39.55 26.31
Solyc06g076930.1.1 Tomato nucleus 43.85 25.75
TraesCS6D01G094800.1 Wheat plasma membrane 16.49 14.9
VIT_04s0008g04840.t01 Wine grape plasma membrane 13.86 10.37
Os09t0332300-00 Rice plasma membrane 9.56 9.69
Os09t0333000-00 Rice plasma membrane 9.2 9.48
Os08t0384500-01 Rice plasma membrane 8.6 9.44
Solyc12g019640.1.1 Tomato plasma membrane 4.78 6.58
Os01t0342750-01 Rice plasma membrane 5.14 6.13
Solyc02g055530.2.1 Tomato extracellular 0.36 5.17
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300InterPro:AAA+_ATPaseInterPro:ABCG_PDR_1InterPro:ABC_2_transInterPro:ABC_trans_N
InterPro:ABC_transporter-likeGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887GO:GO:0042626GO:GO:0055085
InterPro:IPR003439UniProt:K4DDI7InterPro:P-loop_NTPaseInterPro:PDR_assocPFAM:PF00005PFAM:PF01061
PFAM:PF08370PFAM:PF14510PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF443SMART:SM00382
SUPFAM:SSF52540EnsemblPlantsGene:Solyc12g019620.1EnsemblPlants:Solyc12g019620.1.1TMHMM:TMhelixUniParc:UPI000276985FSEG:seg
Description
No Description!
Coordinates
chr12:+:10929890..10937376
Molecular Weight (calculated)
95044.2 Da
IEP (calculated)
8.046
GRAVY (calculated)
0.036
Length
837 amino acids
Sequence
(BLAST)
001: MEGIEISDSN RWKKDEEEVL KWEDNEHDVP TYNNNDNVIR RGSDDERIIS LSMEEKRNLL NRLMNIPQAE EDNHNFLLKL KQRFHRVGIE FPKIEVRVEH
101: LTVEAEAYAG TRALPTMFNF TIDVIEGALN YFHVLPKRKK SFSILNDVSG IIKPGRMTLL LGPPGCGKTT LLLALAGKLN SDVKVCGKVS YNGHGMDEFV
201: PERTCAYISQ DDVHLANLTV RETLEFSARC QGVGPRYEML EELLKREKEA NIKPDPDIDM FMKAASVQGK EPNIITDYTL KILGLEICAE TLVGDEMVRG
301: ISGGQLKRLT TGEMMVGPAR ALFMDEISTG LDSSTTFQIV KSIRQSIHIL KGTALISLLQ PAPETYGLFD DVILLADGRI VYQGPREHVL EFFEYVGFKC
401: PRRKGVADFL QEVTSRKDQE QYWARKDEPY KFVSSREFFE AFQSFHVGRE LSNDLSVPFD KANKHPDALT TNKYGVKKRE LLKACMSREI LLMKRNIFVY
501: LFKIIQHLLL ASITMTLFLR IKMPKETQTD GFIFMGALFF TVIAAMFNGC SEVPFTILKL PVFFKQHNLL FFPVWAYTLP AWIVKIPISI IESSIWVSIT
601: YYAIGFDPNI VRFSKQLFLV ICVDQMASGL FRFMAAVGRK MIIANTLGSL ALLLVLVMGG FIMDRDDVKK WWLWGYWCSP MMYLEKCKKS FSCFEISHTN
701: FISSELVLLL QNVPGSTDKL GVVVLKSRAI FSDAHWYWIG VGAVLGYVVF FNLMATLALT YLKRMCYLSD LSCNYFHLSS SKILLKSSIL YAAFGKSGAV
801: LPDETVAQRK TKIRNIDINS STGGTSCLYD SILLVNI
Best Arabidopsis Sequence Match ( AT1G15210.1 )
(BLAST)
0001: MDYDPAHAMS RGGSMRQTIS RSVSKASRNM EDIFNTSSRR TKSVNEDEEA LKWASIEKLP TYNRLRTSLM PELGEDDVYG NQILNKAVDV TKLDGEERQK
0101: FIDMVFKVAE QDNERILTKL RNRIDRVGIQ LPTVEVRYDH LTVKADCYTG DRSLPSLLNA VRNMGEAALG MIGIRLAKKA QLTILKDVSG IVKPSRMTLL
0201: LGPPSSGKTT LLLALAGKLD KSLDVSGEVT YNGYRLNEFV PIKTSAYISQ NDLHVGIMTV KETLDFSARC QGVGTRYDLL NELARREKDA GIFPEADVDL
0301: FMKASAAQGV KSSLITDYTL KILGLDICKD TIVGDDMMRG ISGGQKKRVT TGEMIVGPTK TLFMDEISTG LDSSTTFQIV KCLQQIVHLT EATVLISLLQ
0401: PAPETFDLFD DIILLSEGQI VYQGPRDHIL EFFESFGFKC PERKGTADFL QEVTSKKDQE QYWVDPNRPY RYIPVSEFAS SFKKFHVGSK LSNELSVPYD
0501: KSKSHKAALM FDKYSIKKTE LLKSCWDKEW MLMKRNSFFY VFKTVQIIII AAITSTLYLR TEMHTRNEID ANIYVGSLLF AMIVNMFNGL AEMAMTIQRL
0601: PVFYKQRDLL FHPPWTYTLP TFLLGIPISI FESTAWMVVT YYSIGYAPDA ERFFKQFLII FLIQQMAAGI FRFIASTCRT MTIANTGGVL VLLVVFLTGG
0701: FLLPRSEIPV WWRWAYWISP LSYAFNAITV NELFAPRWMN KMSGNSTTRL GTSVLNIWDV FDDKNWYWIG VGGLLGFTVI FNGFFTLALT YLDPLGKAQA
0801: ILPKEEDEEA KGKAGSNKET EMESVSAKKG MVLPFTPLAM SFDDVKYFVD MPAEMREQGV QETRLQLLKG VTSAFRPGVL TALMGVSGAG KTTLMDVLAG
0901: RKTGGYIEGD VRVSGFPKKQ ETFARISGYC EQTDIHSPQV TVRESLIFSA FLRLAKEVSK EDKLMFVDQV MELVELVDLR DAIVGLPGVT GLSTEQRKRL
1001: TIAVELVANP SIIFMDEPTS GLDARAAAIV MRAVRNTVDT GRTVVCTIHQ PSIDIFEAFD ELLLMKRGGH VIYSGPLGRN SHKVVEYFES FPGVPKIPEK
1101: YNPATWMLEA SSLAAELKLG VDFAELYKAS ALCQRNKALV QELSVPPQGA TDLYFATQFS QNTWGQFKSC LWKQWWTYWR SPDYNLVRFI FTLATSLMIG
1201: SVFWQIGGKR SNVQDLTMVI GAIYAAVVFV GINNCSTVQP MVAVERTVFY REKAAGMYSA IPYAISQVTC ELPYVLIQTT YYSLIIYSMV GFEWKASKFL
1301: WFIFINYFSF LYWTYYGMMT VSLTPNQQVA SIFASAFYGI FNLFSGFFIP RPKIPKWWVW YYWICPVAWT IYGLITSQYG DVETPIALLG GAPGLTVKQY
1401: IKDQYGFESD YMGPVAGVLV GFTVFFAFIF AFCIKTLNFQ SR
Arabidopsis Description
ABCG35PDR7 [Source:UniProtKB/TrEMBL;Acc:A0A178WAD4]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.